CI01000304_08232073_08235598


Basic Information

Item Value
gene id CI01000304_08232073_08235598
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8231293 ~ 8235655 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_08232073_08235598.mRNA
GTATAAAATGAAGATCAATTTTTTGACAAATAACATAGATATTAACATTTTTAAACATCAAAATTTCTTGTTAAAATATGAATGATGAAAAATGTGAAGTGTATTTTTAAGCTGTTGACTTTTTAAAATATTTTATGTAGTAGGCCTATCTAAATAAATATGCAGTCACAAACACCAGTTGTTTAATAATTTTACAATAATTATTAAAAGAATAATTTAAATTTACATGAAATTCAATATAGGGTCTGAGACTAGATTTAAAATCTGGGCTTCAAAATTTAATTTTAAATCTGGAAGTGTTTTAGACAATATGTCTTAGAAAGAAATATTTAACATTCTACAATTTTGTGACGATGAGCATGAGAGCTTTGTACAGGTGGTTGTTCTTGCTTCCACTGAAGTACAAAATGTTCTTCGGATCATTTTCAAATCATGTTGGAGAACGTTTAAAAAAGGTTCATGCAGCTTAAGTGTTGTTATCACTAAAGCAAAAGAGGAACATAAATATATCATTTTTCAGAATTTTTAGTTAAACTTTTTACTCGCATTGTTATTCTAATAATATATTCCGATTTCTAGAGAAATGTAAGGAAACATCCAATACTGTCGTGGGTTATCGTGTCAACCACTCATACACCTCTAGAGGGCGTCAGCGTCCACTGCGTCGATTTTGAAAAGGGGAGGGGGGGGAGAAACACATAGCACTATTGCGCATGTGCAGCAGTGTTATCACGCTTCGCTTCCAGACCAGTAGTGATTTTTGTGTAGTATATAGTCATCATGAAGGCTCTTAGGGGAATGGTGAGCGGAGCCGTGAGCGAAATATCATCTGCGGTTACCGGGAGCAAACACGTCGCCGTTCGGGAAAATGTCCTTGCCGTGACTCGTGACTACATTTCTCAGCCGAGATTGACATATAAAACCGTGGCTGGTGTTAATGGACCGCTTGTGATTTTGGATCAAGTGAAGCCAAAGGAAACATCAGCTAATTTGTTTGGAAAGTACTGTCTGGATTACATTGATGTTTTTGATGCAATGTTAACTAGTTACCTGGTGCAGTTTCCCAGGTATGCTGAGATTGTTCATCTGACTCTCCCTGATGGCACCAAGAGGAGTGGACAAGTGCTGGAGGTCACAGGCTCCAAAGCTGTGGTTCAGAAGTCTATTACAGGTCGTGTGTTCAACGGATCAGGAAAGCCGATTGATCGAGGGCCTGCAGTGCTGGCGGAGGACTACTTGGACATCATGGGTACATTTCAGTGTGGCTTTGTGATGCGCCACATAAGCTGTTATGCCATTATTGCTTTTTTTATAATCATGATATATGTACCATCCAATTCCCTCATGCTTCTTGCAGGTCAGCCGATTAATCCTCAGTGCCGTATTTATCCTGAGGAGATGATCCAGACCGGCATCTCTGCCATTGATGGCATGAACAGTATTGCCAGAGGTCAAAAAATTCCCATTTTCTCTGCGGCTGGTCTACCCCACAATGAGGTGTTTGAGGGAACATCTGGTATTGATGCCGAAAAAATGTGAGTGAATTTACACTGGACATTTTGAGTACACCAGTGTCCAAGGATATGCTGGGTAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_08232073_08235598.mRNA False 1596 mRNA 0.39 5 8231293 8235655

Neighbor

gene id symbol gene type direction distance location
CI01000304_08222591_08229908 NA coding upstream 346 8222591 ~ 8230947 (+)
CI01000304_08120416_08124549 LRRTM4L1 coding upstream 106696 8120416 ~ 8124597 (+)
CI01000304_07989774_08014921 IGSF9A coding upstream 215989 7988902 ~ 8015304 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding upstream 250573 7979078 ~ 7980735 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding upstream 272831 7927790 ~ 7958462 (+)
CI01000304_08547909_08562342 XPO7 coding downstream 312254 8547909 ~ 8562604 (+)
CI01000304_08582404_08594691 DMTN coding downstream 346749 8582404 ~ 8594884 (+)
CI01000304_08624038_08653167 PPP3CCA, PPP3CCB, PPP3CC, PP2BC coding downstream 388383 8624038 ~ 8653550 (+)
CI01000304_08671901_08672203 NA coding downstream 436149 8671770 ~ 8672555 (+)
CI01000304_08741397_08752689 NA coding downstream 505742 8741397 ~ 8752689 (+)
G423011 NA non-coding upstream 11110 8219614 ~ 8220183 (+)
G423020 NA non-coding upstream 69602 8160555 ~ 8161691 (+)
G423046 NA non-coding upstream 78057 8152857 ~ 8153236 (+)
G423043 NA non-coding upstream 80123 8150802 ~ 8151170 (+)
G423041 NA non-coding upstream 82853 8148071 ~ 8148440 (+)
G423085 NA non-coding downstream 39965 8275620 ~ 8279848 (+)
G423093 NA non-coding downstream 57232 8292887 ~ 8293121 (+)
G423099 NA non-coding downstream 75217 8310872 ~ 8311078 (+)
G423101 NA non-coding downstream 76759 8312414 ~ 8312712 (+)
G423105 NA non-coding downstream 89082 8324737 ~ 8324963 (+)
G421435 NA other upstream 746605 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 876961 7352621 ~ 7354396 (+)
G421162 NA other upstream 1988296 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 3054502 5173426 ~ 5176791 (+)
G423614 NA other downstream 713381 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 1328950 9561005 ~ 9565778 (+)
G424246 NA other downstream 1884744 10116343 ~ 10127322 (+)
G424251 NA other downstream 1953167 10188822 ~ 10189404 (+)

Expression


Co-expression Network