CI01000304_08671901_08672203


Basic Information

Item Value
gene id CI01000304_08671901_08672203
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8671770 ~ 8672555 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_08671901_08672203.mRNA
CTATAAAACCGGCAGTTATCTTCAATGCTGGAGTCACTGAGAGCACAGCCGCTGCTATCAGACATAGGACATCTCGAAAACTATCTTTTCTGCCGACATGTCTTCATACGCGTCTTCAGACTCGCGTCGCGTCAGTCCCGCAGTGAGCGGCGTCAAATTCGACACGGCGCACCGCAAGAAAGCGTCGCCGAACATCTTTGAGAACATCAACCAGGATGTGCTGGTGAAACTCTTCGAGAAAGCAGGAGACCTGAAGGCGGTGGAGAGAGCCAGGAGCATCCACGCGCTGTACCAGGATCCCGAGGGCATCTCCAAAGCACTTATGGCTCTTCAGCAGGACAAGAAGGACAAATTTATGCTTATTACTGGACTGACGCGCCAGCCGATGAAGTTTCGTTGAGGGAAGTTTTCGTCGGGAAGCTGTGCAGATATGTGCACAGATAAAAAGACCGTGATCACTCGGCACATGTTGGAGGCTGGTGTTCTTCAAGACTTCGTGCTGAACTTGATGGCGTCCTACCAGAGTCGTGTTGGTGTGCTGTGAAAATAGAGAACTGATCCAGTGACTGAAATGATCCAGACCAACGAAGGTTGAGCTTGAAGACACCCGAGTATTGATGCTTCTTGTGTTGACACACCATGCAGGACATTTAAAAATATATTGCCACGGGCGAAATTTGATTATGAAGAGGCTCAGTATCAGCAGTGTCTATTGCAATGTAACAGTCTACTTGGGGGGAAAAAAATTGA
>TU486091
TCAAAAGGGAATTCTCGCTCTGTCAGTCAGTCCCCTATAAAACCGGCAGTTATCTTCAATGCTGGAGTCACTGAGAGCACAGCCGCTGCTATCAGACATAGGACATCTCGAAAACTATCTTTTCTGCCGACATGTCTTCATACGCGTCTTCAGACTCGCGTCGCGTCAGTCCCGCAGTGAGCGGCGTCAAATTCGACACGGCGCACCGCAAGAAAGCGTCGCCGAACATCTTTGAGAACATCAACCAGGATGTGCTGGTGAAACTCTTCGAGAAAGCAGGAGACCTGAAGGCGGTGGAGAGAGCCAGGAGCATCCACGCGCTGTACCAGGATCCCGAGGGCATCTCCAAAGCACTTATGGCTCTTCAGCAGGACAAGAAGGACAAATTTATGCTTATTACTGGACTGACGCGCCAGCCGATGAAGTTTCGTTGAGGGAAGTTTTCGTCGGGAAGCTGTGCAGATATGTGCACAGATAAAAAGACCGTGATCACTCGGCACATGTTGGAGGCTGGTGTTCTTCAAGACTTCGTGCTGAACTTGATGGCGTCCTACCAGAGTCGTGTTGGTGTGCTGTGAAAATAGAGAACTGATCCAGTGACTGAAATGATCCAGACCAACGAAGGTTGAGCTTGAAGACACCCGAGTATTGATGCTTCTTGTGTTGACACACCATGCAGGACATTTAAAAATATATTGCCACGGGCGAAATTTGATTATGAAGAGGCTCAGTATCAGCAGTGTCTATTGCAATGTAACAGTCTACTTGGGGGGAAAAAAATTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_08671901_08672203.mRNA False 750 mRNA 0.49 1 8671804 8672553
TU486091 True 786 TUCP 0.49 1 8671770 8672555

Neighbor

gene id symbol gene type direction distance location
CI01000304_08624038_08653167 PPP3CCA, PPP3CCB, PPP3CC, PP2BC coding upstream 18254 8624038 ~ 8653550 (+)
CI01000304_08582404_08594691 DMTN coding upstream 76920 8582404 ~ 8594884 (+)
CI01000304_08547909_08562342 XPO7 coding upstream 109200 8547909 ~ 8562604 (+)
CI01000304_08232073_08235598 NA coding upstream 436149 8231293 ~ 8235655 (+)
CI01000304_08222591_08229908 NA coding upstream 440857 8222591 ~ 8230947 (+)
CI01000304_08741397_08752689 NA coding downstream 68844 8741397 ~ 8752689 (+)
CI01000304_08864119_08871322 LETM2 coding downstream 191224 8863777 ~ 8871689 (+)
CI01000304_08878926_08892802 NA coding downstream 206373 8878926 ~ 8894049 (+)
CI01000304_08895917_08897236 NA coding downstream 223050 8895603 ~ 8897532 (+)
CI01000304_09030903_09042018 NA coding downstream 358013 9030566 ~ 9042041 (+)
G423256 NA non-coding upstream 71152 8600449 ~ 8600652 (+)
G423254 NA non-coding upstream 72720 8598717 ~ 8599084 (+)
G423252 NA non-coding upstream 129127 8542430 ~ 8542677 (+)
G423243 NA non-coding upstream 149237 8521550 ~ 8522567 (+)
G423242 NA non-coding upstream 157547 8513906 ~ 8514257 (+)
G423315 NA non-coding downstream 189328 8861881 ~ 8862095 (+)
G423310 NA non-coding downstream 225429 8897982 ~ 8908476 (+)
G423318 NA non-coding downstream 231958 8904511 ~ 8905000 (+)
G423324 NA non-coding downstream 243865 8916418 ~ 8934956 (+)
G423649 NA non-coding downstream 335442 9007995 ~ 9008699 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 691069 7979078 ~ 7980735 (+)
G421435 NA other upstream 1187116 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 1317472 7352621 ~ 7354396 (+)
G421162 NA other upstream 2428807 6241233 ~ 6242997 (+)
G423614 NA other downstream 276483 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 892052 9561005 ~ 9565778 (+)
G424246 NA other downstream 1447846 10116343 ~ 10127322 (+)
G424251 NA other downstream 1516269 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 1882733 10555216 ~ 10572164 (+)
G423234 NA non-coding upstream 134904 8483902 ~ 8536866 (+)

Expression


Co-expression Network