CI01000304_08741397_08752689


Basic Information

Item Value
gene id CI01000304_08741397_08752689
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8741397 ~ 8752689 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_08741397_08752689.mRNA
ACGCACAGCTTGCAGGACCTGCGGCAAGCAGCCGTCGCCTCCAAGGTTTTCGTTCAGAGAGACTACACCTCCGGCACCATTTGCAAGTTTCAGACCAAGTTCCCAGCAGAGCTGGAGAGCAGGATTGACAAGCAGCAGTTTGAGGAGACCATGCAGACCCTGAATAATCTCTATGCAGAGGCGGAGAAGCTGGGCGGCAGGTCATATCTGGAGGGCTGTCTGGCCTGTCTCACTGCATACACAATCTTCCTCTGCATGGAGACCCACTATGAGAAGGTGCTGAAAAAGATTGCCAAATCGTCCTCCAGCACCCTGGCTCTTCCTTGCGTCAGTGGCTGTTACCTCCCCAAACAAGAGACTGCATTCATCCATTCCGTCCGTGGGGAGCTGGACGTATTTCAACAGAAAAATGAGCTGAAAAGTGTTCTACTCTTCCCGCCTGTCCCGAGCCGACTCCGCTTCCTGATTCACCAAACCACTGCCAATCTCCCCAACCTCAGCACATTCTCTGTGGGTGAGGGCTGCGCCCGCAGAGTCGTGGTGTGCTATTCCGACCTCAGATTGCCAGAAGAGGATCATAGAGATACAGAAATCAGCTCCCATGTACGAGCACGCAGTCGGGACAGGGAAATGGAGGACAAAGGCAACAGACACAGAGCCAGACGGCCAGACAAGGCTATTTATGTTCCACGCGCTATGAGACATAAGGTAGATCTGGAGCAACTAAATCTCAAGGAATCATCAGAGGATTCTAGCTCTGATGTTGCTAAGGAACCTCTTGTATCTGATCAGGAGACAGAGGTAGACAGCACTGACCAATCATTGGCCGATCAGGAGTTTGTGCAGCTTTCAAGGACCGGGCCTTCCCCGTGGCCTCCAGCCTGGGACCAGACTGTGTCTTTCTTCATGTCTTTGACATTAGATGACCAAGCAGATGAAAATTGTGCCAACAACACAGTCCTTCCCATTGATGCGACACTCCAGCAGAAGAACTTTGATGAGAGTTTGCTCTCTGAGATCAAAGCCAAACTCAAATGTGGGGACATCACCATACTGAACACCTGCAATGATTTCCCCGCCTATGCAAACATCTGGCTTGACCCAGAGGAGTTCGGCCACGTCATTGAGATCTACAACTTTCCTGCCTTTTTTAAAACAGACGACCTTCTTGATGCCTTTGCTGATTATAGTGAAGGGGGGATGAAGATCAAGTGGGTGGATAACACTCATGCTCTTGGAATATTTTCAAGTCAGTCGGCAGCTACACAGGCGCTGTCTCTTCAACACCCGATACTGAAGACCCGCTCGCTTCTAGAGGGGAGCCAGAAAGCAAAGTGGAAAGCAGCCAGACGAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_08741397_08752689.mRNA True 1357 mRNA 0.51 9 8741397 8752689

Neighbor

gene id symbol gene type direction distance location
CI01000304_08671901_08672203 NA coding upstream 68844 8671770 ~ 8672555 (+)
CI01000304_08624038_08653167 PPP3CCA, PPP3CCB, PPP3CC, PP2BC coding upstream 87847 8624038 ~ 8653550 (+)
CI01000304_08582404_08594691 DMTN coding upstream 146513 8582404 ~ 8594884 (+)
CI01000304_08547909_08562342 XPO7 coding upstream 178793 8547909 ~ 8562604 (+)
CI01000304_08232073_08235598 NA coding upstream 505742 8231293 ~ 8235655 (+)
CI01000304_08864119_08871322 LETM2 coding downstream 111088 8863777 ~ 8871689 (+)
CI01000304_08878926_08892802 NA coding downstream 126237 8878926 ~ 8894049 (+)
CI01000304_08895917_08897236 NA coding downstream 142914 8895603 ~ 8897532 (+)
CI01000304_09030903_09042018 NA coding downstream 277877 9030566 ~ 9042041 (+)
CI01000304_09178746_09214392 NA coding downstream 425985 9178674 ~ 9215108 (+)
G423256 NA non-coding upstream 140745 8600449 ~ 8600652 (+)
G423254 NA non-coding upstream 142313 8598717 ~ 8599084 (+)
G423252 NA non-coding upstream 198720 8542430 ~ 8542677 (+)
G423243 NA non-coding upstream 218830 8521550 ~ 8522567 (+)
G423242 NA non-coding upstream 227140 8513906 ~ 8514257 (+)
G423315 NA non-coding downstream 109192 8861881 ~ 8862095 (+)
G423310 NA non-coding downstream 145293 8897982 ~ 8908476 (+)
G423318 NA non-coding downstream 151822 8904511 ~ 8905000 (+)
G423324 NA non-coding downstream 163729 8916418 ~ 8934956 (+)
G423649 NA non-coding downstream 255306 9007995 ~ 9008699 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 760662 7979078 ~ 7980735 (+)
G421435 NA other upstream 1256709 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 1387065 7352621 ~ 7354396 (+)
G423614 NA other downstream 196347 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 811916 9561005 ~ 9565778 (+)
G424246 NA other downstream 1367710 10116343 ~ 10127322 (+)
G424251 NA other downstream 1436133 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 1802597 10555216 ~ 10572164 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002064 r3hcc1 coding NC_007121.7 CM002894.2 20392083 ~ 20402161 (+)