CI01000304_08899490_08900383


Basic Information

Item Value
gene id CI01000304_08899490_08900383
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8899161 ~ 8900772 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_08899490_08900383.mRNA
AAAATCAAAACATGTACCTGAGAAAACAGAAGTAACAGAGTGAGTTCATATAGGCCCATTCCAGCATATACGACGACTCGTGCTGGCGCGCTGGCCTTACACACACAAACTGGTAAGTGCAATCGAGATGAACAAATTCAAAATATATAACCCATGGTTCAAAATAATGTATTCTTACAAAATCAAAACATGTACCTGAGAAAACAGAAGTAACAGAGTGAGTTCATATAGGCCCATTCCAGCATATACGACGACTCGTGCTGGCGCTACAATAAAACACATTTTTCACACTCTTCAGCATCCAATACTTTTCTCAATATTATATATATATATGTTGTTGCCGCTAATATATCACACATTTAATTGACAATTACAGAGCTTTCAATGACATGACTTACCGCGGGCCTTACACACACAAACTGGGTCATCTAATCATGATGGGTAATCAGAAGCTCCTGATCGTGTGGGTGTGGATGTTACTGGTGGCGTCGTTTTATCCTTGGGCCCACTGCAAACGTAGAGGGGGTTTTGGTAACAGGGGCAAAGGAGTGGGTCTGCCAGCCAGAGCGCCTCCTTCCCAGAGCAAAGGATCATCCAATCAGGGTCTGAAAGTGGCAGGTGCTGCAGCCGCGGGGGCTATCGGAGGAGCAGCCATCGGTTATGGGCTGGGCTCTCTGGGCAGACCGAGGTACGGCTACGACGGCCGCTCTGAAGACGACAGGCGCTATAACCGCGATGGACCTGGATACCACAATCGCTCAGACTGGCAGTATCGCTCAGACAGGAGCACAGGCAGCTCAGAGCATGTGACCAGCATCCTCCTAACACTTGGAACAGTGGCACACATCTTTTTGTGGGGATGAATTATTACAGGGTTTGTGACAGTTGTCTCACTGAGAGACAATTTCATAGTGCAAAAGGGTTTAATTTTAAACAGAGGATGCAATCATTTTCTTTGATGAAGTGAAACTTTTTTTTACCAGCAATTTTTTTATCAGCAACATACTTAGAGGAATATGAAATGTGAGACAGGTAGGCTATATATATATATATATATATATATATATATATATATATTGCTATATATGAGCAATCACACGAGTAGCCGTGCGATTGTATAAATATATATATACACCAAGTCAAGGTAAGGTAAATTGAAAGGTTGAGTTAATTCAAATGTTTACCTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_08899490_08900383.mRNA True 1192 mRNA 0.42 2 8899161 8900772

Neighbor

gene id symbol gene type direction distance location
CI01000304_08836330_08859572 WHSC1L1 coding downstream 38432 8835882 ~ 8860729 (-)
CI01000304_08829163_08833955 PLPP5 coding downstream 65206 8828785 ~ 8833955 (-)
CI01000304_08819813_08827793 DDHD2 coding downstream 71368 8818948 ~ 8827793 (-)
CI01000304_08789401_08798907 TACC1 coding downstream 100128 8789228 ~ 8799033 (-)
CI01000304_08754563_08783858 LOXL2A, LOXL2 coding downstream 115303 8753993 ~ 8783858 (-)
CI01000304_08904762_08909795 NA coding upstream 3706 8904478 ~ 8910490 (-)
CI01000304_08913076_08936241 KCNIP3B, KCNIP3 coding upstream 11930 8912702 ~ 8936241 (-)
CI01000304_09046090_09129612 PCDH1 coding upstream 145318 9046090 ~ 9129612 (-)
CI01000304_09284328_09286980 AVD coding upstream 383417 9284189 ~ 9287032 (-)
CI01000304_09342385_09345935 NA coding upstream 441082 9341854 ~ 9345935 (-)
G423589 NA non-coding downstream 226149 8672676 ~ 8673012 (-)
G423588 NA non-coding downstream 226581 8671798 ~ 8672580 (-)
G423557 NA non-coding downstream 356475 8542460 ~ 8542686 (-)
G423551 NA non-coding downstream 384920 8513906 ~ 8514241 (-)
G423529 NA non-coding downstream 420497 8478182 ~ 8478664 (-)
G423615 NA non-coding upstream 48272 8949044 ~ 8949311 (-)
G423960 NA non-coding upstream 106836 9007608 ~ 9008693 (-)
G423972 NA non-coding upstream 136841 9037613 ~ 9098217 (-)
G424004 NA non-coding upstream 261030 9161802 ~ 9162014 (-)
G424006 NA non-coding upstream 263746 9164518 ~ 9164832 (-)
G423386 NA other downstream 33865 8862223 ~ 8865296 (-)
G422810 NA other downstream 1246458 7630159 ~ 7652703 (-)
G422378 NA other downstream 2116115 6744679 ~ 6783046 (-)
G422354 NA other downstream 2267662 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 2415666 6480743 ~ 6483986 (-)
CI01000304_09566730_09575706 NA other upstream 667584 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 835974 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 1252674 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 1289802 10190574 ~ 10192357 (-)
G424808 NA other upstream 1543583 10444355 ~ 10542665 (-)

Expression


Co-expression Network