CI01000304_09566730_09575706


Basic Information

Item Value
gene id CI01000304_09566730_09575706
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9566730 ~ 9575706 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_09566730_09575706.mRNA
ATCACGATGGACGAAAATTATCCCATCGTTGTCGAAGGAGACTGGGGACCTGAACACGCTAAAAGTGTTAAAAATAAACTTTATATTCACTTTCAGAGTAAGAAGAAATCCCAGGGAGGAGACTGCGTCTTGCAATATGATGACAAGAGCAACTCTGCTACGATTCTGTATAAATCATCTGACATCCGAGATGCCGTACTCTCCCAGGCAGAACACATTATTACTATTGACAGTAAGCAAATCAAGTTGAACGTGTACAAACCCAGCGATGTAGAGGAACAAGCAGACAACACTGGACAAAGCCTTCACAACAAACAACCTGCAATGACATTGAATAAATATGTGTCACTTTTAGATGAAAGTACCCCTCAGACTGAGTTGGATGTGAAGACGCATCAAGAGTCAAGTGTTGTGGTCCTGGAGAACCTTCCAGATGATGTTAAACAAGATGTTTTGACTCTTTTGGTGGAGAACATCACAAGTCTTTCTGAAAATGACTTCACCATTGAATTAATACTAGAATTAAGAAAAGCAGTTGTGACCTTTAAAAATCCCAGTGATGCAGAAAAGTTCCTTGTGGACAGCAGGACGCATACAAAGTTCAAGAAGAATAATCTGAGGGCCCGCACATTGGAGAGAAGCACGTGTGTGCGGGTGGAGAATCTTCCAGATGAGGCCAACAACAACAAGATGCTGCTGGAACTGTATTTTGAGAAATGGGGTGGTCCAGTAGAGGAAGTTATCACAATTCCATCAGAACAAGCAGCCATTATTACATTTATGGAGGAAGAAGCCAAAGAGAGAATCTTGAAGCGAGAGAATAACATCTGTGATGTTCCAGTCAAGATATATCCCTACTTTAAATCACTGGATACAGTCTTGTATGGTGGAAACAGACCACATTTGAAGCTGCCTGATCCCATTACAGTCAGTGTACATCCTGCCATCAGAGAGTTCCTTCTCAAGAAAGGGGAGATTTCCTCTATTAAAGACCAGATGAGCTCACACTTCTGCCAAATAAACATGGACAAACCTGAAGCTTTGCTCAGTCCTGATCCAGCATTACTGAAACAGAAAGGAGTTACCAGAAGACACGTTGATGGCTGGAGTAAGAATGCCTGTGATTCCTTCATGAAAATAATATCAAACTACACAAAGTCTGAGTGGCCAGTGTCACACCCCTTGTGGTCTAAAGTGGAGAGTGATGTTAAGGAATTAGTGAAAGATAAGGTTTTCACAGATATGGATGCCTCTAAAGGTGTCCTGACACTGGCGGGAATGACCCATGAGATAACTGGACTGAAACTCATCATGGAGAAAATTTTAGAGAGAGCAACAAATCAAATAGAGATAGAGAAGAACAGTGTGACAGAGCAAATGGAGATATCTCCTGCCATGTACTCTCTGCTTTTACAAGATGGCCTGAAAAGTGCTGTTTCTCCAAACCTGCACATTGACTACAACAAAAAAATAAACAGCTTGGTTTTATCAGGTCTTAATACAGAAATCCTCATGTTCAAGAATTGGGTTCTTGAGAAGAAAATAAATATGAAACAGAAGCCCTTAAAGATTGACCATTCAATTCTGGAGTACCTGAGATCAGTGAATTGTGATGAAATGTCCACAGATCTCTTTATATCTCATGGAATAACTGCTGTCTACACAATCGAAAATGAAGATGTTGTTGTGATTGGGAGCACAGAAAAAGCACTTGTTGAGGCAGAGAAGAGGGTGAATATGGTTCTTAAATCCAAAGACCTCATTATAGAAGATCAGAGTGTCCTTCAAATGACAGAGTGGCAGGATCTCAAAAAAGAATTGCAGGAATTGTTCAATACTTCCAAAAAAATATCTGTATTTATAAACTTATCTAAACAGAGAGACAAAGTAATAGTGACTGGATTCAAAGAACCAGTGATGGAGGTCAGTGAGAGCTTAGGATGTTTCATTGAGAAACACACAAGAATTGAAGAAACCGTTCGTGTAAAATCACATGCAGCGGTTGAATTCATAAAAGACAAAAAATCACAAGACTGGCAGCATTTAATGAAGTCTAATGAGTTGAAAATGAATTTTGATTCAAAGAGACCCTGGATCAAACTGTCTGGAGAGCGAGGATTTGTCCAGCCAGCTATGACTTTCTTTAAAAGGTTGGCAGATTCTCTCTACACAGACACACATATCATTAAAAAGGCAGGTGCAAAGAAGTACTTCAAGGAACAGGGTAAAATGATGCTGTCAATGCTGTTGAAGGAAAAAAGATTTGTGGTGGTTCTCCAGGAAGATGACATGCTGGAACAGGAAGAGGATGAATTTACTGAAAGCAGTTTTGAAGATTTTGGCCAGGTCTCTTGTGAAGTTCTAATGCCAAGTGGAGTAACTGTTACTGTCAGGATGGCGGACATTTGCAAGCTCAGTGTTGATGCTGTGGTCAATGCTGCTAATAAAGATCTGATGCACAGTGGTGGTGTAGCTTTCGCACTTCTCCAAGCTGCTGGACCACGTCTACAGCAATATTGTGAACATTACATAAAAGAAAATGGGCCTCTGAAACCTGGAGATGCCATCATCACTGAAGCTGGTCGTCTTCCCTGTAAATATGTGGTACACGCTGTTGGACCTCGCTTCAGCGATTCAGACCGACGCACCACCGTACAACTCCTGAGACGTGCTGTGAGGGAAAGCTTGAACCAGGCATCAAGCAAAAACTGCTCCTCCATTGCAATTCCAGTTATTAGTTCAGGGATATTTGGTTGTCCTCTTGAACTTTGCACTGAATCAATTGCCAAGGAAGTGTGTGAGTACATCAAAGATCAAAACCCCAGAGGTTCCAGTAGCACATTAACTGAGATACAGTTGGTTGACAATAATGGCAGCACTGTAAATGCCATGGCTCAAGCTGTCCGAAAGGAGTTTGCTGCTTATAACCCCAAAATGAATTTCCCTCATCAAACCAAACCTCATGGGTATAATAAATTTGAAGGATTGAGTGTTGGTCTTGAGACCAAAACTACAAAAGAGGGACTAAAAATCAATCTGAGCAAAGGGAACATCCAGGATGCATGTGCTGATGTCATTGTAAACACTATATCGGAGGACTTGGACCTCAGTAAAGGTGCCGTCTCCAAAGCACTCCTTCAGACTGCTGGTCATCAGCTCCAGTCAGAAATCACCAGAGCTGTGCACTCAAACAATCTGAATTATGGTGAAATGGTCATCACAGATGGTTATAAACTGAAATGTTCCAAAGTCTTTCATGTAGTTTGCCCATTATGGAATGGTGGACAAGACTCAGCAGACAGGGTACTCATTCAGATCATTAGAGATTGCCTGAGAAAAGCAGAAACCCATGGAATGGCTTCAGTTGTCTTCCCAGCTATCGGCACTGGGAATCTTGGCTTTCCTAAAGATCTCGTGGCCAGAATCATGCTGACAGAATTCCAGGAATTTAACTCTACAGATCTTCGAGAGGTAACTGTGATTGTGCACCCATCTGACAAGGAGAGCATTCAGTGCTTTACCAGCATCTTCAGACACGAGATTCAGCGTCCCACCGCAAAAGGAGCATCTCAGCATTTTATGCCTAAAATAAATATGCCTGGCAAGTCAGCTCAGACCTCTGGGCTTTTTGGCAAAGTTTCCTCTCCCTCTCTTGGAGTACACACTATGAAGCTGGGTCCATTGACTCTGGAGGTTTCATCTGGAGATATAACTAAAGAAAAAACTGATGCCATTGTCAACTCCTCAAATAAGACATTTTCTCTGAAAGCAGGAGTATCCAAGGCCATTTTAGACTCTGCTGGATTACAAGTGGAACAAGAATGTATACAGATTGTGAGATCATCAAACATGCAGCAAACTGAGATTGTGACCTCAGCCGGGCACCTGCCATGTGGAAACATTATCCATATTATTGGACGCAATAGTCCATCTGAAATTAAGGATGTTGTTTTGTCAGTTCTGAAGTTATGTGAAAAAAGCCAGTTCACCTCCATTGCCTTTCCAGCTCTTGGCACTGGTCAGGGTGGTATAAATCCAGCTGATGTCGCAGATGCAATGGTTGATGCAGTTGTTGACTTTGTGAAGAGAAAGAAACCGGTGCATGTAAAGCTTGTAAAGTTTCTTATATTCCAGACAAACATGTTGTCAGACTTCCACCAAAGCATGGTCAGAAGATCTGGTGAGAAAGTAGAAGAGGATAAAAGTCTGCTTACCAAATTTAAAGACTTTTTTTGGGGGGGGAATTCAGAATCTCCCACAAATGAAGAGATTGTGGTGGTGGTTGAAAAAATTGAGCCAGCTGTGTTCCAACTGTGTGGAGAGACACCAGAGGACCTGAGGGAAGCCAAGGATATGATCAACAGCTTGATACTACAGGAGCATTTGACCATCCCAATTCGTGATCCAGCCATTGCTCATTTCAACAAGGAGGATGTAGAAATGCTGAACGGCATGCAAAGGGAATTCACAGTCAGTGTCCGACTTGAGAAGAAAGGCCAAGATTCTGTCGTCACATTGGAGGGCCTGACAAGAGACGTTCACAGTGCAGAGAGTCGTATTCGGGACATGATCCGCAAGGTGGAAAGGAACGAATACCGAAGACGTGAGGCATTTATAATCAGCAGTATGGTTAATTGGCAATATCAGGAGAATGGACGCAGCCTCAAAAACTTTGATATGTTGACTAATTATGAGCTGGAACAGGCCTATCAGAAGAGCCAGCCTTCAGTGAGAATCAAGATTAATAATGATGATTATGAGGCTGATTTAGTTCGCAAAGAGGCCGTAAGAGGGAAAATGAGGATTGAACTGAACAGAGTAGATCTGCAAGATGCAGCTCAAAGTTCTTTGCCTTCACACTGGGAGGACATGAAAGGAAAGTCAGTTGTTCTTGTAAAACTCACAGCAGGCTTGAATGAATATGCAGAAGTGGAGAAAGAGTTCAGAAGAACTGGACTGTCCTCTAAGATTATTGAAATTGAAAGAGTTCAGAACAGCACACTTTGGAAAAACTACATGATCAAAAAGGAGGAACTGGAAGACAAAAACAAGCATAAAAACAATGAGAAGCGTCTTTTCCATGGCACTGGTCCTAATCAGACTGTTCAGATCAACCATCATGGCTTCAATCGCAGCTACGCTGGGATACATGGTATCAGAGCCGTGTATGGGAATGGTACATATTTTGCTGTGGACCCGATTTACTCAGCCCAAGGCTACTCAAATCCTGATGCCAAAGGACTTAAACGCATGTACCTCGCCAGGGTGCTTGTCGGTGATTTCACTCAAGGAAAACGAGGCCTTCCTGTTCCCCCTGCGAAGAGCTCAAATAGTGCTGATCTCTATAACAGTGTGACTGACGACATCAACAACCCAACCATGTTTGTGATCTTCAATGATGTACAGGCTTACCCAGAATACTTAATCACCTTCCAG
>TU487066
CGCAATAGTCCATCTGAAATTAAGGATGTTGTTTTGTCAGTTCTGAAGTTATGTGAAAAAAGCCAGTTCACCTCCATTGCCTTTCCAGCTCTTGGCACTGGTCAGGGTGGTATAAATCCAGCTGATGTCGCAGATGCAATGGTTGATGCAGTTGTTGACTTTGTGAAGAGAAAGAAACCGGTGCATGTAAAGCTTGTAAAGTTTCTTATATTCCAGACAAACATGTTGTCAGACTTCCACCAAAGCATGGTCAGAAGATCTGGTGAGAAAGTAGAAGAGGATAAAAGTCTGCTTACCAAATTTAAAGACTTTTTTTGGGGGGGGAATTCAGAATCTCCCACAAATGAAGAGATTGTGGTGGTGGTTGAAAAAATTGAGCCAGCTGTGTTCCAACTGTGTGGAGAGACACCAGAGGACCTGAGGGAAGCCA

Function

NR:

description
Poly [ADP-ribose] polymerase 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_09566730_09575706.mRNA False 5436 mRNA 0.42 17 9566730 9575706
TU487066 True 430 TUCP 0.43 3 9568356 9569034

Neighbor

gene id symbol gene type direction distance location
CI01000304_09508090_09519201 NA coding downstream 47397 9507297 ~ 9519333 (-)
CI01000304_09342385_09345935 NA coding downstream 220795 9341854 ~ 9345935 (-)
CI01000304_09284328_09286980 AVD coding downstream 279698 9284189 ~ 9287032 (-)
CI01000304_09046090_09129612 PCDH1 coding downstream 437118 9046090 ~ 9129612 (-)
CI01000304_08913076_08936241 KCNIP3B, KCNIP3 coding downstream 630489 8912702 ~ 8936241 (-)
CI01000304_09577749_09578512 NA coding upstream 413 9576119 ~ 9578512 (-)
CI01000304_09609674_09619712 NA coding upstream 33804 9609510 ~ 9620030 (-)
CI01000304_09622805_09640521 NA coding upstream 46670 9622376 ~ 9640540 (-)
CI01000304_09699524_09703985 TLX3B coding upstream 123662 9699368 ~ 9706659 (-)
CI01000304_09720695_09725068 UGT5G2 coding upstream 144570 9720276 ~ 9725068 (-)
G424181 NA non-coding downstream 3641 9562722 ~ 9563089 (-)
G424162 NA non-coding downstream 35406 9529683 ~ 9531324 (-)
G424158 NA non-coding downstream 46329 9520143 ~ 9520401 (-)
G424066 NA non-coding downstream 61969 9441337 ~ 9504761 (-)
G424052 NA non-coding downstream 63419 9499007 ~ 9503311 (-)
G424187 NA non-coding upstream 69791 9645497 ~ 9645723 (-)
G424188 NA non-coding upstream 70108 9645814 ~ 9646065 (-)
G424190 NA non-coding upstream 73955 9649661 ~ 9649877 (-)
G424170 NA non-coding upstream 82624 9658330 ~ 9659287 (-)
G424196 NA non-coding upstream 83877 9659583 ~ 9660325 (-)
G423386 NA other downstream 701434 8862223 ~ 8865296 (-)
G422810 NA other downstream 1914027 7630159 ~ 7652703 (-)
G422378 NA other downstream 2783684 6744679 ~ 6783046 (-)
G422354 NA other downstream 2935231 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 3083235 6480743 ~ 6483986 (-)
CI01000304_09737662_09738777 NA other upstream 161040 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 577740 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 614868 10190574 ~ 10192357 (-)
G424808 NA other upstream 868649 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1771314 11338019 ~ 11348212 (-)

Expression


Co-expression Network