CI01000304_09609674_09619712


Basic Information

Item Value
gene id CI01000304_09609674_09619712
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9609510 ~ 9620030 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_09609674_09619712.mRNA
AATATCCAAAAGTAAAAGCTTAAAAGCAATAAAATCTACACAGCTGTATATTTTATTATGTTTAATAGGCACAATGTATGTCAAAAATGTCAATGTAATAGGCCTACACCACTGTGTTTGTTTATTGGATGTTTTCGGGTAGTTTATATGAACAATCACACTACTATCGTTCCTGTGTTGTAAACAGGCCACACTGTCGGTTTCACGGTGAACCGAAGCAGAAACGAAAATGAAAATAATTAGGCGGGCGTGATCAAATATAGGCTACGGCAGTTGATTATTATTGGAGTAACTTCCGCGTTGACCAGAAGGATCAAGATGGACGAATATTATCCCATCATTGTCGAGGGAGACTTGGGGGCTGAACACGCTAAAAGTGTGAAAAATAAACTTCATATTCACTTTCAGAGTAAGAAGAAATCCCAGGGAGGAGACTGCGTCGTGCAATATAATGACAAGAGCGATTCTGCTACGATTCTGTTTAAATCATCTGACATCCGAGATGCCGTACTCTCCCAGGCAGAACACATCATTACTATTGACAGTAAGAAAATCAAGCTGAAAGTGTTCAAACCCAGCGATGTAGAGGAACTAGCAGACAACACTGGACAAAGAGTGGACCAGGCATGTGGATATCAGGAACCAAATGAAAGTACCCCTCAGACTGAGTTGGATGTGAAGACACATCAAGAGTCAAGTGTTGTGGTCCTGGAGAACCTTCCAGATGATGTTAAACAAGATGTTTTGACTCTTCTGGTGGAGAACATCACAAGTCTTTCTGAAAATGACTTCACCATAGAATTAATAAGAAAAGCAGTTGTGACATTTAAAAATCCCATTGATGCAGGAAAGTTCCTTGAGGACAGCAGGACACATGAGAAATTCAAGAAGAATAATCTGAGGGCCCGTACATTGGAGAGAAGCACGTGTGTGCGGGTGGAGAATCTTCCAGATGAGGCCAACAACAACAAGATGCTGCTGGAAAAGTATTTTGAGAAATGGGGTGGTCCAGTAGAGGAAGTTATCACAATTCCATCAGAACAAGCAGCCATTATTACCTTTAAGGAGGAAGAAGGAGCCATTTATGGGAATGGTACATATTTTGCGGTGGACCCGAGTTATTCAGCTCGAGGCTACTCTAACCCTTATGTCAGAGGACTTAAACGCATGTATCTCGCCAGGGTGCTTGTCGGTGATTTCACTCAAGGAAAACAAGGCCTTCCTGTTCCCCCTCGAAAGAGCTCCAATAGTGCTGATCTCTATAACAGCGTGACTGACAACATCAACAACCCAAGCATGTTTGTGGTCTTCAATGATGTACAGGCTTACCCAGAATACCTAATCACCTTCCAGTAGTGATTATGAGATCTCAGTTTCTGTTCAGCTAGTGTTTTTGCTGCTGTTTTACGTTGATTTGGTGTAGCTGAACATACTGCTATGTTTAAGTTTTACTGGCAATGTAGACTGTAGCATCTTGCTTATATAAATGACAAAAACTGCGAGAACAGTAATTTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_09609674_09619712.mRNA True 1520 mRNA 0.41 6 9609510 9620030

Neighbor

gene id symbol gene type direction distance location
CI01000304_09577749_09578512 NA coding downstream 30998 9576119 ~ 9578512 (-)
CI01000304_09566730_09575706 NA coding downstream 33804 9566730 ~ 9575706 (-)
CI01000304_09508090_09519201 NA coding downstream 90177 9507297 ~ 9519333 (-)
CI01000304_09342385_09345935 NA coding downstream 263575 9341854 ~ 9345935 (-)
CI01000304_09284328_09286980 AVD coding downstream 322478 9284189 ~ 9287032 (-)
CI01000304_09622805_09640521 NA coding upstream 2346 9622376 ~ 9640540 (-)
CI01000304_09699524_09703985 TLX3B coding upstream 79338 9699368 ~ 9706659 (-)
CI01000304_09720695_09725068 UGT5G2 coding upstream 100246 9720276 ~ 9725068 (-)
CI01000304_09726631_09727403 NA coding upstream 105917 9725947 ~ 9730308 (-)
CI01000304_09737662_09738777 NA coding upstream 117196 9736746 ~ 9738777 (-)
G424181 NA non-coding downstream 46421 9562722 ~ 9563089 (-)
G424162 NA non-coding downstream 78186 9529683 ~ 9531324 (-)
G424158 NA non-coding downstream 89109 9520143 ~ 9520401 (-)
G424052 NA non-coding downstream 106199 9499007 ~ 9503311 (-)
G424065 NA non-coding downstream 111917 9471070 ~ 9497593 (-)
G424187 NA non-coding upstream 25467 9645497 ~ 9645723 (-)
G424188 NA non-coding upstream 25784 9645814 ~ 9646065 (-)
G424190 NA non-coding upstream 29631 9649661 ~ 9649877 (-)
G424170 NA non-coding upstream 38300 9658330 ~ 9659287 (-)
G424196 NA non-coding upstream 39553 9659583 ~ 9660325 (-)
G423386 NA other downstream 744214 8862223 ~ 8865296 (-)
G422810 NA other downstream 1956807 7630159 ~ 7652703 (-)
G422378 NA other downstream 2826464 6744679 ~ 6783046 (-)
G422354 NA other downstream 2978011 6631086 ~ 6631499 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 533416 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 570544 10190574 ~ 10192357 (-)
G424808 NA other upstream 824325 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1726990 11338019 ~ 11348212 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002735 FO744833.1 coding NC_007121.7 CM002894.2 21938762 ~ 21941443 (-)