CI01000304_09737662_09738777


Basic Information

Item Value
gene id CI01000304_09737662_09738777
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9736746 ~ 9738777 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_09737662_09738777.mRNA
CTGTAAGCATGTCGAAATCAATGGTAGTCACGCAGCCACAGCCTGTTATGGTCTCTAGACATTCTGACCAATGGGGGTCAGGCACCTTTGACTGCTGCGATGACATGTCTGAATGCTGCTTTGCTTTCTGGTGTTTACCGTGTTTCACGTGCATAAAAGCCAAGAATTACGGTGAGTGCTTATGTCTCCCCCTGCTGGACTTCTTCGGGTGCGTCCCACCCATAACCATGTCCATAAGAGTCTCAATGCGCCAGCGTTATGGGATTAAGAGCATGCGTTTGGTGTCAGATGTCACGAGAGATGAAAGCACGAGATCTACAAATCACTCTTGTTGGTGCCAGGAATTTATAATGTGTTTTGAAGTAGCTATGCTGTTTGTGTATATACTACAAATGAAGAAATCTTGAAGGAAAATGAAGGAAAATCTTTTTGTAATGAAAACAGTAAATGCCTGTGCTGTCATATATCTTTATGTCAGGTACTCTGCTTCTAATCTGCATAATATCATGACAAGTGTGATCAGCTAAATTAGTGTGTGACACATCTATATGAAAACTTTATGGAAAAAAATATACTGTTGTTTATTTGCGACAATAGTAAAAAGTACTTAAAATCATCAGTGTTTTTTTGTCTTATAAACCTTATTAAAACAATTCAGAAATTTCTGTAATTCTGTAATTGAGCAGAACACAAAGAAAAACAATTTGCATTTAGTTATGGCATGATAAATGTGTATGAGAAAAGAAAAGTGTATTGCTTCCCAACATGTTTGCTTTTCCCATTTGCCTTTATTGTGGGACTGAAAATCTTTGATATCTTTCACATGTGTTGTTAAACAATAAA

Function

NR:

description
Cornifelin homolog B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_09737662_09738777.mRNA False 843 mRNA 0.37 3 9737226 9738777

Neighbor

gene id symbol gene type direction distance location
CI01000304_09726631_09727403 NA coding downstream 6918 9725947 ~ 9730308 (-)
CI01000304_09720695_09725068 UGT5G2 coding downstream 12158 9720276 ~ 9725068 (-)
CI01000304_09699524_09703985 TLX3B coding downstream 30567 9699368 ~ 9706659 (-)
CI01000304_09622805_09640521 NA coding downstream 96686 9622376 ~ 9640540 (-)
CI01000304_09609674_09619712 NA coding downstream 117196 9609510 ~ 9620030 (-)
CI01000304_09751291_09754997 CLDN7B, CLDX, CLDN7 coding upstream 12144 9750921 ~ 9755245 (-)
CI01000304_09765626_09814386 FGF11B, FGF11, FGF11A coding upstream 26849 9765626 ~ 9814386 (-)
CI01000304_09944778_09945833 NA coding upstream 205846 9944623 ~ 9945833 (-)
CI01000304_09949821_09951564 NA coding upstream 210388 9949165 ~ 9953257 (-)
CI01000304_09955649_09957311 NA coding upstream 216777 9955554 ~ 9959307 (-)
G424159 NA non-coding downstream 39903 9695733 ~ 9697323 (-)
G424169 NA non-coding downstream 41847 9694525 ~ 9695379 (-)
G424203 NA non-coding downstream 45986 9676129 ~ 9691240 (-)
G424202 NA non-coding downstream 62139 9674873 ~ 9675087 (-)
G424201 NA non-coding downstream 65179 9671744 ~ 9672047 (-)
G424217 NA non-coding upstream 4791 9743568 ~ 9744018 (-)
G424218 NA non-coding upstream 5428 9744205 ~ 9744618 (-)
G424239 NA non-coding upstream 101330 9840107 ~ 9840527 (-)
G424418 NA non-coding upstream 238482 9977259 ~ 9977486 (-)
G424448 NA non-coding upstream 294817 10033594 ~ 10036068 (-)
CI01000304_09566730_09575706 NA other downstream 168192 9566730 ~ 9575706 (-)
G423386 NA other downstream 871930 8862223 ~ 8865296 (-)
G422810 NA other downstream 2084523 7630159 ~ 7652703 (-)
G422378 NA other downstream 2954180 6744679 ~ 6783046 (-)
G422354 NA other downstream 3105727 6631086 ~ 6631499 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 414669 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 451797 10190574 ~ 10192357 (-)
G424808 NA other upstream 705578 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1608243 11338019 ~ 11348212 (-)
G425580 NA other upstream 2129900 11868677 ~ 11872906 (-)

Expression


Co-expression Network