CI01000304_09765626_09814386 (FGF11B, FGF11, FGF11A)


Basic Information

Item Value
gene id CI01000304_09765626_09814386
gene name FGF11B, FGF11, FGF11A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9765626 ~ 9814386 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_09765626_09814386.mRNA
ATGGCAGCTCTTGCCAGTTCTCTCATCAGACAAAAACGGGCAGTCAAGGAGGACCAGGCCAACCGGCCGATAGCCAACAAACGCAAGCCGTGCCCCAAGAGCAACAAGTCCCTTTGCCAGAAACAAATTCTCGTTCTTATATCAAAAGTACGATTATGTGGCGGCCGAAGAGGAAGAACAGACAAAAGACCAGAGCCACAGCTAAAAGGCATCGTCACCCGTCTGTACAGCCAGCATGGCTACTACCTGCAGATGCTGCCGGATGGCACCATGGACGGCACAAGGGACGAGAACAGCTGCTTCTCACAGTTCAACTTGATTCCTGTGGGTCTGCGGATAGTGGCAATTCAGGGAGCGAAGACTGGTTTCTACCTGGGCATGAACAGCGAGGGATATCTCTACACTTCTGAGCATTTCAACCCCGAGTGCAAATTCAAAGAGAGTGTGTTTGAGAACTACTATGTGACGTACTCCTCCATGCTGTACCGCCAAAGCCAGTCGGGACGCTCGTGGTACATTGGCATCAACCGGGACGGCCAAGTAATGAAGGGCAACCGTGTGAAGAAGACCAAAGCGGCCGCACACTTCCTACCTAAAGTCATCGAAGTGGCCATGTACAAGGAACCTTCACTGCATGAGCTTGTAGCAGAGCAGAGTCCTCCTCGCAAAACCGTAAAGACTTCGGACTCCCCCTCCCACCAGAACGGCAGGAAAGAGGCCCCCAGAGCTGATGCTTCA

Function

symbol description
fgf11a Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of voltage-gated sodium channel activity. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and nucleus. Is expressed in kidney. Orthologous to human FGF11 (fibroblast growth factor 11).
fgf11b Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of voltage-gated sodium channel activity. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and nucleus. Orthologous to human FGF11 (fibroblast growth factor 11).
fgf11 Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of voltage-gated sodium channel activity. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and nucleus.

NR:

description
fibroblast growth factor 12

GO:

id name namespace
GO:0005102 signaling receptor binding molecular_function

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_09765626_09814386.mRNA True 738 mRNA 0.53 5 9765626 9814386

Neighbor

gene id symbol gene type direction distance location
CI01000304_09751291_09754997 CLDN7B, CLDX, CLDN7 coding downstream 10381 9750921 ~ 9755245 (-)
CI01000304_09737662_09738777 NA coding downstream 26849 9736746 ~ 9738777 (-)
CI01000304_09726631_09727403 NA coding downstream 35318 9725947 ~ 9730308 (-)
CI01000304_09720695_09725068 UGT5G2 coding downstream 40558 9720276 ~ 9725068 (-)
CI01000304_09699524_09703985 TLX3B coding downstream 58967 9699368 ~ 9706659 (-)
CI01000304_09944778_09945833 NA coding upstream 130237 9944623 ~ 9945833 (-)
CI01000304_09949821_09951564 NA coding upstream 134779 9949165 ~ 9953257 (-)
CI01000304_09955649_09957311 NA coding upstream 141168 9955554 ~ 9959307 (-)
CI01000304_10119297_10119833 NA coding upstream 304504 10118890 ~ 10119833 (-)
CI01000304_10123588_10128249 PCOLCE, PCOLCEA coding upstream 309021 10123407 ~ 10128249 (-)
G424218 NA non-coding downstream 21008 9744205 ~ 9744618 (-)
G424217 NA non-coding downstream 21608 9743568 ~ 9744018 (-)
G424159 NA non-coding downstream 68303 9695733 ~ 9697323 (-)
G424169 NA non-coding downstream 70247 9694525 ~ 9695379 (-)
G424203 NA non-coding downstream 74386 9676129 ~ 9691240 (-)
G424239 NA non-coding upstream 25721 9840107 ~ 9840527 (-)
G424418 NA non-coding upstream 162873 9977259 ~ 9977486 (-)
G424448 NA non-coding upstream 219208 10033594 ~ 10036068 (-)
G424482 NA non-coding upstream 247879 10062265 ~ 10062752 (-)
G424474 NA non-coding upstream 268012 10082398 ~ 10090227 (-)
CI01000304_09566730_09575706 NA other downstream 196592 9566730 ~ 9575706 (-)
G423386 NA other downstream 900330 8862223 ~ 8865296 (-)
G422810 NA other downstream 2112923 7630159 ~ 7652703 (-)
G422378 NA other downstream 2982580 6744679 ~ 6783046 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 339060 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 376188 10190574 ~ 10192357 (-)
G424808 NA other upstream 629969 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1532634 11338019 ~ 11348212 (-)
G425580 NA other upstream 2054291 11868677 ~ 11872906 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002743 fgf11b coding NC_007121.7 CM002894.2 22161585 ~ 22249444 (-)