CI01000304_09944778_09945833


Basic Information

Item Value
gene id CI01000304_09944778_09945833
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9944623 ~ 9945833 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_09944778_09945833.mRNA
GTCTGGTGTCAGTTTTGATAGTGTTTGTGTGGCTGGGTGGAAACCAGGTCTCGCCCCTCCGACCCATCTGCGACCTGAGGGTTCTGGACCACTTTGTTCAAGAAGCTCGAGATTCTGAAATCATCATGCGAGGTTGCAGAGGAGGCTGTGGAGTGATGAAATCCTACTTTGTTCCTCTGACTAGAGTAGACTTCGCTGTTTGGGAACATATAGACGTTCAGAGTCAGGCTGTGGAAGTCCAGACTGGACTGTCTCTGCTGGTTCAAGCCCTGAGTACAGCGAAGAAAACAGTGAGCAACTCTCCTCTGGCCAGCACTCTGGATAACAACATCAGCAACATCCACAGCCTCGGCCAGATCCTGCACAGTCTTGATTTACAGGCATGTCATAATAGCTGTCCGTGAGTGGAGGATGTTGCAATAGTAGGATACTAACCTTTTAGGGAACTTCATATTTTAACCTACTTCTGTCATGAAAGTGCAAAATGATTTTTAGACATGACTCTAAACTGCAGCGATAGCAATATATTAATGCTCAGGCAAAAGTTTGGAATAATTAA

Function

NR:

description
erythropoietin brain specific isoform

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_09944778_09945833.mRNA True 559 mRNA 0.46 4 9944623 9945833

Neighbor

gene id symbol gene type direction distance location
CI01000304_09765626_09814386 FGF11B, FGF11, FGF11A coding downstream 130237 9765626 ~ 9814386 (-)
CI01000304_09751291_09754997 CLDN7B, CLDX, CLDN7 coding downstream 189378 9750921 ~ 9755245 (-)
CI01000304_09737662_09738777 NA coding downstream 205846 9736746 ~ 9738777 (-)
CI01000304_09726631_09727403 NA coding downstream 214315 9725947 ~ 9730308 (-)
CI01000304_09720695_09725068 UGT5G2 coding downstream 219555 9720276 ~ 9725068 (-)
CI01000304_09949821_09951564 NA coding upstream 3332 9949165 ~ 9953257 (-)
CI01000304_09955649_09957311 NA coding upstream 9721 9955554 ~ 9959307 (-)
CI01000304_10119297_10119833 NA coding upstream 173057 10118890 ~ 10119833 (-)
CI01000304_10123588_10128249 PCOLCE, PCOLCEA coding upstream 177574 10123407 ~ 10128249 (-)
CI01000304_10137324_10147067 PER1A coding upstream 191207 10137040 ~ 10149531 (-)
G424239 NA non-coding downstream 104096 9840107 ~ 9840527 (-)
G424218 NA non-coding downstream 200005 9744205 ~ 9744618 (-)
G424217 NA non-coding downstream 200605 9743568 ~ 9744018 (-)
G424159 NA non-coding downstream 247300 9695733 ~ 9697323 (-)
G424169 NA non-coding downstream 249244 9694525 ~ 9695379 (-)
G424418 NA non-coding upstream 31426 9977259 ~ 9977486 (-)
G424448 NA non-coding upstream 87761 10033594 ~ 10036068 (-)
G424482 NA non-coding upstream 116432 10062265 ~ 10062752 (-)
G424474 NA non-coding upstream 136565 10082398 ~ 10090227 (-)
G424496 NA non-coding upstream 213815 10159648 ~ 10160361 (-)
CI01000304_09566730_09575706 NA other downstream 375589 9566730 ~ 9575706 (-)
G423386 NA other downstream 1079327 8862223 ~ 8865296 (-)
G422810 NA other downstream 2291920 7630159 ~ 7652703 (-)
G422378 NA other downstream 3161577 6744679 ~ 6783046 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 207613 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 244741 10190574 ~ 10192357 (-)
G424808 NA other upstream 498522 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1401187 11338019 ~ 11348212 (-)
G425580 NA other upstream 1922844 11868677 ~ 11872906 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location