Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000304_09961620_09975855 |
| gene name | GIGYF1 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 9961620 ~ 9975870 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| gigyf1 | Predicted to be involved in insulin-like growth factor receptor signaling pathway. Part of protein-containing complex. |
| id | description |
|---|---|
| K18730 | GIGYF; PERQ amino acid-rich with GYF domain-containing protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000304_09961620_09975855.mRNA | True | 3376 | mRNA | 0.52 | 22 | 9961620 | 9975870 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_09879900_09938234 | NLGN2, NLGN2A, NLGN2B | coding | upstream | 22299 | 9879854 ~ 9939321 (+) |
| CI01000304_09757695_09760278 | NA | coding | upstream | 200921 | 9757093 ~ 9760699 (+) |
| CI01000304_09695997_09696577 | NA | coding | upstream | 264477 | 9695997 ~ 9697143 (+) |
| CI01000304_09692774_09694613 | NA | coding | upstream | 267007 | 9692774 ~ 9694613 (+) |
| CI01000304_09683383_09690928 | KCNIP1B, KCNIP1 | coding | upstream | 270679 | 9683383 ~ 9690941 (+) |
| CI01000304_09976509_10020020 | EFNB3A | coding | downstream | 639 | 9976509 ~ 10020575 (+) |
| CI01000304_10093597_10099497 | KDM6BA, KDM6BB, KDM6B | coding | downstream | 117727 | 10093597 ~ 10099497 (+) |
| CI01000304_10112119_10114490 | TMEM88A | coding | downstream | 134108 | 10109978 ~ 10114826 (+) |
| CI01000304_10172353_10175399 | AP4M1 | coding | downstream | 196483 | 10172353 ~ 10175694 (+) |
| CI01000304_10177319_10186557 | ARRB2.L, ARRB2A, ARRB2, ARRB2B | coding | downstream | 201449 | 10177319 ~ 10186665 (+) |
| G423892 | NA | non-coding | upstream | 247333 | 9714061 ~ 9714287 (+) |
| G423878 | NA | non-coding | upstream | 300065 | 9661163 ~ 9661555 (+) |
| G423877 | NA | non-coding | upstream | 300776 | 9660434 ~ 9660844 (+) |
| G423876 | NA | non-coding | upstream | 301462 | 9659708 ~ 9660158 (+) |
| G423842 | NA | non-coding | upstream | 302348 | 9658246 ~ 9659272 (+) |
| G424323 | NA | non-coding | downstream | 86564 | 10062434 ~ 10062747 (+) |
| G424326 | NA | non-coding | downstream | 90225 | 10066095 ~ 10066360 (+) |
| G424277 | NA | non-coding | downstream | 139464 | 10115334 ~ 10115681 (+) |
| G424246 | NA | non-coding | downstream | 140473 | 10116343 ~ 10127322 (+) |
| G424257 | NA | non-coding | downstream | 159622 | 10135492 ~ 10137641 (+) |
| CI01000304_09564068_09565679 | HRH2B | other | upstream | 396047 | 9561005 ~ 9565778 (+) |
| G423614 | NA | other | upstream | 1012198 | 8949036 ~ 8949422 (+) |
| CI01000304_08671901_08672203 | NA | other | upstream | 1289065 | 8671770 ~ 8672555 (+) |
| CI01000304_08232073_08235598 | NA | other | upstream | 1726660 | 8231293 ~ 8235655 (+) |
| CI01000304_07979388_07979919 | TMEM230, TMEM230A | other | upstream | 1980885 | 7979078 ~ 7980735 (+) |
| G424251 | NA | other | downstream | 212952 | 10188822 ~ 10189404 (+) |
| CI01000304_10555326_10571933 | NA | other | downstream | 579416 | 10555216 ~ 10572164 (+) |
| G425718 | NA | other | downstream | 2452835 | 12436554 ~ 12436605 (+) |
| CI01000304_13578347_13595075 | NA | other | downstream | 3580581 | 13578049 ~ 13595097 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| bowfin (Amia calva) | AMCG00004725 | gigyf1,LOC106577760 | misc | PESF01000027.1 | PESF01000027.1 | 229415 ~ 242003 (+) |
