CI01000304_10187728_10188909


Basic Information

Item Value
gene id CI01000304_10187728_10188909
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10187271 ~ 10188909 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10187728_10188909.mRNA
ATGACTGGATGCTCTGACAGTGTCCAGGCTGGAGGAGATGCTGGACTTTCACATCAAACTCTGGCAAGGCAGCTCAAGCAGAAAATATCAGATCTGACCAGCAATATATACCTGAAGGAGGCGGAGTTACAATACTGTCACTCACAAGTTGCCCATTACAGGACAGAAGCGGTTTTGTTGGCCCAGGGGGCTTCCTGTCTGAAGTCTGATCTGGAGGAATATGAGTATCAGCTGGAGTGTCAATCAAAGGAACTGACAGCACTGAGATTGGAGCACAACATACTGAGAGAGGAACTGGCTGCCACAAAACTCCAGAAGGAGCAGCTCCTAGACCGCTGGTTAGAGGAGAAAAAAGAAGAGGCCGAGAGGATTAATAAGCACAATGCCACACAAGAAAGGTGGCAACGTTTGGCTGGTCGACTGAAGAAGCGGTATCGTGGCAGGTCTCGCCCAACACCGTGTGCAGCTAACAGCAGCTCAGATATCAAACCGACAGAGCCTAAAATTTAGCGTCCTCCTTCTTAAAACAAACGTAGTTATGGAGGAAAGTGAATTTTATTATGTTTCTGGTGATTTTTCCACACTTTTGGAGATTATTTTATAACAAGCATTTAAGCGCTTCAAAAAATGATTTTCTTACTCATTTTTTTATGTCGTTTTCCAGTACAAATATCTTCTTAAATCAAGAAACATTTACTTGAGAAGCAAAATGACTTAAGATATTATCTTGTTTTCTGAAAAAAAAAGATTTTTCTGACCCTATTGGCAGATTTTTCCTGTTTTAAGCATAAACTCACTTAATTTTAAGTAATTTGGCTTCTCTAGTAAATGTCTTAATTTAAGAATGTTTATGTGCTGGAAAACAAGAAAAAAAATACTGAATAAAGAAATCATTTTTTTTTGCAGTGTGAGAGCAAACACCTTGACTTTTCTCAGCAAATTGCTGAATTCAAAGGTTAGTAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10187728_10188909.mRNA True 967 mRNA 0.39 4 10187271 10188909

Neighbor

gene id symbol gene type direction distance location
CI01000304_10167646_10169639 NA coding downstream 17632 10166187 ~ 10169639 (-)
CI01000304_10160458_10161768 VAMP2 coding downstream 23509 10160458 ~ 10163762 (-)
CI01000304_10137324_10147067 PER1A coding downstream 37740 10137040 ~ 10149531 (-)
CI01000304_10123588_10128249 PCOLCE, PCOLCEA coding downstream 59022 10123407 ~ 10128249 (-)
CI01000304_10119297_10119833 NA coding downstream 67438 10118890 ~ 10119833 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK coding upstream 2489 10190574 ~ 10192357 (-)
CI01000304_10209150_10210418 NA coding upstream 19726 10208635 ~ 10210891 (-)
CI01000304_10220812_10226103 NA coding upstream 30680 10219589 ~ 10226103 (-)
CI01000304_10284509_10291314 NLE1, NLE1.S coding upstream 95600 10284509 ~ 10291314 (-)
CI01000304_10350748_10388571 CADM2A coding upstream 160960 10349869 ~ 10388602 (-)
G424504 NA non-coding downstream 13124 10173599 ~ 10174147 (-)
G424496 NA non-coding downstream 26910 10159648 ~ 10160361 (-)
G424474 NA non-coding downstream 97044 10082398 ~ 10090227 (-)
G424482 NA non-coding downstream 124519 10062265 ~ 10062752 (-)
G424448 NA non-coding downstream 151203 10033594 ~ 10036068 (-)
G424535 NA non-coding upstream 63312 10252221 ~ 10252462 (-)
G424797 NA non-coding upstream 73162 10262071 ~ 10262340 (-)
G424823 NA non-coding upstream 83014 10271923 ~ 10272411 (-)
G424829 NA non-coding upstream 128393 10317302 ~ 10317531 (-)
G424830 NA non-coding upstream 128702 10317611 ~ 10318093 (-)
CI01000304_09737662_09738777 NA other downstream 447800 9736746 ~ 9738777 (-)
CI01000304_09566730_09575706 NA other downstream 618237 9566730 ~ 9575706 (-)
G423386 NA other downstream 1321975 8862223 ~ 8865296 (-)
G422810 NA other downstream 2534568 7630159 ~ 7652703 (-)
G424808 NA other upstream 255446 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1158111 11338019 ~ 11348212 (-)
G425580 NA other upstream 1679768 11868677 ~ 11872906 (-)
G426106 NA other upstream 2147792 12336701 ~ 12340228 (-)

Expression


Co-expression Network