CI01000304_10473174_10473651


Basic Information

Item Value
gene id CI01000304_10473174_10473651
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10472092 ~ 10473725 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10473174_10473651.mRNA
ATATAAATAGGAAGTTAAATAAGCAAATCACAAACAGTTTCATAAATTTCATTTAGAACATGAACAACAGTCAGATTGTTGAAGTTAAGGTATAAATCATGGATGTGTTTAGGGGGATCTGATGCCCCCAGTTAAGTTCCCAAAATAACTCAGAATAAAAAAGTTTGCGGATCTTAAATGTATATATTCTTTATATAAACAACAGTCTGCTCAAGCATTCTCTTTGTGATATTAAAGGGATAGTTCATCCAAAAATGAATATTTTATCATCAGTTCCTCACCTTCACCTTCACCACCCACAAGACTTTCATTGAACCATTCATAGTTTTGGGTGAATAAACTTTTAATGAAGGGACAGAAATCTCTTAGATTTCATTAAAAATAACTTGTGTGTTTCGAATATGTGTATAATATGTGTATTTCGAAGATGAACAAATATCTTGTGGGTTTGGAATGACATGAAAGTGAGTAATTAATAATAGAATTTTCATGTTTGTGTGAACTATAACCCTTAAACAAGTATAGAAAAAAAAACAAAAAAAAAAACAAAGCTAACTGCACTAAGGACAAATAAAAAAACATTAACCATAAACTGATCAGCTCCTGAACTTTTGATGTGCCAGTAACAACCTAAAATTTTCCAACATCACCCACCATTAAAATTAACATTTGCATTTGAACCTTATTTAAATGAACACAATCCACATTGTTCCGACAAATATTTCCAGTGACTTTCTGCAGTGAGCTGAAGTTCCTTTATGCATAAAAACTAACATTTCCACAAAATAGTTCCTTTCTGAATAAATACTGGCCACACAAACACAGATGAAAAGCACAACACAGTTCACTCCAGGAGAGAAACTAGCACTAGTTTGTTGGCATTTTGACAACAACTGTCTAAAAGTGTAAACAAAAATACACACAACTCAGCACAACTCAGAAAATGCACAGAGAAGACAATGAAGATGTCTAAGGATATATATATATATATTTTTTTTACAATTTTCAAATTATTTTTCATTTAGTTAAACGACTGTAACAATTTCAACTGCACTAAGAATGTCTGGGCTGTGAATGATGGTATGGATAAAGGTTCGATGATGGAATCAGAAGACAGAATAGAGAAGACAGTTGATATCTACATCAGTGCTGAGGCTGTAAGAGACATGAAACATAAGAAAGACATGGAGGACTTCAACACATCGAAAACCCAAACCCCTCAACACACAGGAAGTGTTTGTGTGAAGATCAGAAGCTCCAGAGCAGTTCCAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGACTGCAGTCATAGTGCTGTGTGTCCGCATCCATACAAACAACAGCACAAACTACACAGAAGAGACACACCAGCAACTACAATTACCAACCTGACAGAGAAGAGAGAGACCAGCTACTAACCAAGATTACCAACCTGACAGAAGAGAGAAACCTGTTAATAATCCAGA

Function

NR:

description
hypothetical protein cypCar_00006784

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10473174_10473651.mRNA True 1471 mRNA 0.35 2 10472092 10473725

Neighbor

gene id symbol gene type direction distance location
CI01000304_10451536_10470518 CD209 coding upstream 837 10450410 ~ 10471255 (+)
CI01000304_10327313_10328936 NA coding upstream 142700 10327261 ~ 10329392 (+)
CI01000304_10316482_10319012 NA coding upstream 153075 10316308 ~ 10319017 (+)
CI01000304_10292429_10311478 LTN1 coding upstream 160364 10292429 ~ 10311728 (+)
CI01000304_10276598_10283032 SLC25A1, SLC25A1-B, SLC25A1A coding upstream 188342 10276598 ~ 10283750 (+)
CI01000304_10489464_10500854 NA coding downstream 15656 10489381 ~ 10501137 (+)
CI01000304_10504058_10505899 NA coding downstream 29263 10502988 ~ 10506016 (+)
CI01000304_10512196_10516865 NA coding downstream 37798 10511523 ~ 10516916 (+)
CI01000304_10528999_10530630 NA coding downstream 54767 10525290 ~ 10530847 (+)
CI01000304_10541900_10546151 NA coding downstream 66402 10535842 ~ 10546209 (+)
G424376 NA non-coding upstream 218820 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 228879 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 250977 10219120 ~ 10221115 (+)
G424248 NA non-coding upstream 255237 10153444 ~ 10216855 (+)
G424547 NA non-coding downstream 58521 10532246 ~ 10543770 (+)
G424790 NA non-coding downstream 363460 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 376585 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 590793 11064518 ~ 11065557 (+)
G424251 NA other upstream 279197 10188822 ~ 10189404 (+)
G424246 NA other upstream 344770 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 906519 9561005 ~ 9565778 (+)
G423614 NA other upstream 1522670 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1799537 8671770 ~ 8672555 (+)
CI01000304_10555326_10571933 NA other downstream 81561 10555216 ~ 10572164 (+)
G425718 NA other downstream 1954980 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3082726 13578049 ~ 13595097 (+)
G426312 NA other downstream 3856323 14330048 ~ 14330886 (+)
G426828 NA other downstream 4475165 14948890 ~ 14950592 (+)

Expression


Co-expression Network