CI01000304_10489464_10500854


Basic Information

Item Value
gene id CI01000304_10489464_10500854
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10489381 ~ 10501137 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10489464_10500854.mRNA
CTTTAAAAAGAAAACGAGTGCTGACTACATCTACAAAGAACAAGGAACAAAATCGTTTTATTTTTAAAGGTTAAAAAGAAGAAATGTCTGATGGTATTTATGACGATGTGGTCAGGACAGAGCCTGAGGGAATGAACAGAGAGCGAGTGGAGATGATGGTGGAAATCTATGAGGGTGCAGATTGTGTGAGAGATCATGACTTCAGGACAAACACACAAAGACCACTTCAGCATACAGTCATAGTGCTGTGTGTCCGCATCCATACAAACAGCACAAACTACACAGAAGAGACACACCAGTTACTAACTACAATTACCAACCTGACAGAGGAGAGAGACCAGCTAATAACCAAGATCAACAACCACACAGAAGAAAGAGTCCAGCTACTAACCAAGATTACTAACCTGACAGAAGAGAGAGACCAACTACTAAACAAGGACATAACCTTGACAAATGAAAGGGATGGATTAACCAAAAACAATTACCAGACTAAACAAAGAGACCAGTTCAATCAGGAGAGAAACGAACTGTGGAAGATGCTCAATGAAATGGATGGATTTATTTATCAGTCCAGTTTTTACTATATGTCTGCTGAAAAGAAGAGCTGGACTGATAGCAGAAGACACTGTACAGAGAGAGGAGCAGATCTGATCACCATAAACAACAGAGAGGAACAAGAGTTTGTTAAAACGATTTCTGGTAACACTGGAGTCTGGATTGGTCTGACTGACAGTGATGTGGAGGGCAGATGGAAATGGGTTGATGGCTCCAACATGACCTCTGGGTTGTGGATGTTTGGAGAACCAAATGGATATGGAAAAGAGAACTGTGTTGTGTTATATCCATCAGGGTGGTATGATTATCCATTCATAGTGCTGTGTGTCCAACTCTTTACAAACATCGACCTGTTTCAATTCAAGAGTAAAAACATCATGGAAGATAGAGAGCTACTAACAAAGATTACTAACCTGACAGAAGAGAGAGACAAGCTACTCAGCAAGAACACAAACTTGACAAATGAAAGGGATGCATTATTATCCAAGAATGACAACCTCACTAAACAAAGAGACCAGTTAAATCAAGAGAGAAATGAACTGGTGAAGACGCTTAATGAAACAGATGGATGGTTATACTACAAATTCAGTTTTTACTTAACTTCCTATGAGAAGAAGAACTGGACTGAGAGCAGAATATACTGTACAGAGAGAGGAGCAGATTTGATCATCATAAACAACACAGAGGAACAAGAGTTTGTTAACCAGATTTCCAGTCATAAAGAAATCTGGATTGGTCTAAATGAAGAGAACACATGGAAATGGGTTGATGGCACCAACATGACCTCTGGGTTCTGGGGTCCTCAGGAGCCAAATGGAGGTACAGCAGAGAACTGTGCTGTGTCTTTTTCATCAGGGTGGTATGATTATCAATGTAACTATGAATATAGATGGATCTGTGAGAAGAGCTTGGCAAAGTATCACATATAATGAAAAAAAAAAAAAAGTTTATTCAGCACATTTTTAACATGAATAGAGGATTTTCTCTCCTAAACCCCCAAACTTCTTTACATTCTTACATTTAATATGGTGTTTTGCATGTTACTAATGTTTTAAATCATCTTATCATTATTTTATTAAAGTTTAGTTACAGGTGTATTAATGTGTCACTCCACACTGGTCAATGTCAGTTCTGTAACAGCAGACAGTGTTTAAGTTTTTTTAAGAATCATATGTAGAGGATACAACCTCTTAAACTGAGTAGCATCCAGAA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10489464_10500854.mRNA True 1767 mRNA 0.38 9 10489381 10501137

Neighbor

gene id symbol gene type direction distance location
CI01000304_10473174_10473651 NA coding upstream 15656 10472092 ~ 10473725 (+)
CI01000304_10451536_10470518 CD209 coding upstream 18126 10450410 ~ 10471255 (+)
CI01000304_10327313_10328936 NA coding upstream 159989 10327261 ~ 10329392 (+)
CI01000304_10316482_10319012 NA coding upstream 170364 10316308 ~ 10319017 (+)
CI01000304_10292429_10311478 LTN1 coding upstream 177653 10292429 ~ 10311728 (+)
CI01000304_10504058_10505899 NA coding downstream 1851 10502988 ~ 10506016 (+)
CI01000304_10512196_10516865 NA coding downstream 10386 10511523 ~ 10516916 (+)
CI01000304_10528999_10530630 NA coding downstream 27355 10525290 ~ 10530847 (+)
CI01000304_10541900_10546151 NA coding downstream 38990 10535842 ~ 10546209 (+)
CI01000304_10550477_10551812 NA coding downstream 49131 10550268 ~ 10552740 (+)
G424376 NA non-coding upstream 236109 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 246168 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 268266 10219120 ~ 10221115 (+)
G424248 NA non-coding upstream 272526 10153444 ~ 10216855 (+)
G424547 NA non-coding downstream 31109 10532246 ~ 10543770 (+)
G424790 NA non-coding downstream 336048 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 349173 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 563381 11064518 ~ 11065557 (+)
G424251 NA other upstream 296486 10188822 ~ 10189404 (+)
G424246 NA other upstream 362059 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 923808 9561005 ~ 9565778 (+)
G423614 NA other upstream 1539959 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1816826 8671770 ~ 8672555 (+)
CI01000304_10555326_10571933 NA other downstream 54149 10555216 ~ 10572164 (+)
G425718 NA other downstream 1927568 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3055314 13578049 ~ 13595097 (+)
G426312 NA other downstream 3828911 14330048 ~ 14330886 (+)
G426828 NA other downstream 4447753 14948890 ~ 14950592 (+)

Expression


Co-expression Network