CI01000304_10504058_10505899


Basic Information

Item Value
gene id CI01000304_10504058_10505899
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10502988 ~ 10506016 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10504058_10505899.mRNA
GTATAAAGAAGGGAGCCAATCACTTAAAAAGTCTTTCACAACAGGAAACGCTGTGACAACCTATAGCTTTTACATACACAAACATGTCTATCAAGAGATAATATATTTAACAAGATGGACAATATTCTAATCCACTTTAATAAAACACTAAAATCATTCTTGAGTTTTGTCTTTTATTAGATAATTGTCTTCTATTGATCAAGTTAACCTATCAATGTTGACTGAACATGCAGCGTGCAACAGGAAGAAAGCCAGACCACTATGTCCGTAAGCTTCAGGAAGTTGAATAATAAACACCTTATGACTCACATTATTTGCAGTGTGAAGTGACATCACATGCGTGCCTTTGTGTTGAAAGCTTCAAGTGCATGCTGTTGAAACTACTGAAAATGACAAAGGATGGAAAACTGAGATTGCATTAAGGTATGATGTATAATTGTAAACTGTTAGGAATATTGTTTTTCATTAAAGAAACAAGTAAAATCCATAAAACAAGATGCATTTGCAAAATTGTGGAATTTATATAAGAATTCTGTCTTGTTTTAAGGATATTTATACAGGGAAACAATAAAAAATGCTTTTCAAGAGAATTTTTTCCCCTTTTATCTGAAGAAATCAGTGAAATTGTATTTTTTTTTAAACTTCTAACAATTATTTGAGCATATTAAGTTAATTTAAATTGATAAACATTGTTTTGAACATAAATCACCGTATAATAATGTTTTAATAGAGTTTGCATGTTTATGCACATAAGGGGAAAAAAAGAAAAAAAAAGAAAAAAAAAAGAACTTCCCAGTGCTAGTTTAGGCTGGCGCTGTACCATTTACAAAGTATGATGATGAAAGTGTTGAAACAGAGAAATGGAGGAGGAAATACAGAATTGGTGAAACATTCAGTACACTGACCTCTGACTTTTTCTTCTTTTTTAAAAACTATGTTTTGTTCACAGGTGATGCCACATTATCTTAAATTTCACACTTTTTACTCTCACCTCTTGAAAACTTGTTCTTGTTCATTTTTAATTTTCCTACATTCAAGCCGTCAAAATCCATTCTTTCTAAATCAACGATATGAATGCTGCTGGGAAACTGAAGATGGCTAGACAAGATAGCGATGAGATGACTGTGGTTATATTTGCTAGTACAGATGCTATAGACCTACCACATGACATTAGAACAAAGTTAGATGACTTAAACCATCCCGAAGAGGAACAGAGACAACAAATACGAAGTGATTCTAAGGAGAAAAGAAGCTACGGGCCCACAGCGGTGTGTTTGGGGCTGTTATGCATTCTTCTGCTGGTGGCCATCACAGTGCTGTATATAAAGTTCACATGGGAAAACAACCTGTTTCAAACCGAGAATGAGGCAAACTATTGGCTAAGTCTGAGTAAAAACTTGACAGAAGAGAGAGAAGAATTAAGGAAGGACTTGGCCAAACTCCAGGCCAGGCTTTACGAACACGATCATTGCTCTGCAAACCCTAAATGGATAACGAACAACTTCAGTTCTTACTACATTTCCTCCGAGTGGAAGAACTGGACTGACAGCAGACAAGACTGTTTGCAGAGAGGTGCAGATTTGATGATCATAAACAACAGAGAGGAACAAGAATTTCTTAGAACGGTTACGAGTGGAAATATTGTCTGGATTGGTCTGACTGACATTGATGAAGAGGGAGACTGGAAGTGGGTTGATGGCAGCACATTGACCTCTGGGTCTTGGGAGCCCGGGGAGCCAAACAACAAAATATCAAATGAGGACTGTGCTGTATCTATCTTTGATTGGGCTGATTATCCATGTAATTACACCTTTGTATGGATTTGTGAGAAGGATTTAGAGGTTTAACAAAGCTGTCAAAGCATCAAATCTGTACATCCAAAGCAATGCAGTAACTAAATTGATTTGTTGTACTATACAAAACAATAAGAGACTTATTTTAATGAGTATTTGATGCTCATTTCA

Function

NR:

description
C-type lectin domain family 4 member M

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10504058_10505899.mRNA True 1964 mRNA 0.36 5 10502988 10506016

Neighbor

gene id symbol gene type direction distance location
CI01000304_10489464_10500854 NA coding upstream 1851 10489381 ~ 10501137 (+)
CI01000304_10473174_10473651 NA coding upstream 29263 10472092 ~ 10473725 (+)
CI01000304_10451536_10470518 CD209 coding upstream 31733 10450410 ~ 10471255 (+)
CI01000304_10327313_10328936 NA coding upstream 173596 10327261 ~ 10329392 (+)
CI01000304_10316482_10319012 NA coding upstream 183971 10316308 ~ 10319017 (+)
CI01000304_10512196_10516865 NA coding downstream 5507 10511523 ~ 10516916 (+)
CI01000304_10528999_10530630 NA coding downstream 22476 10525290 ~ 10530847 (+)
CI01000304_10541900_10546151 NA coding downstream 34111 10535842 ~ 10546209 (+)
CI01000304_10550477_10551812 NA coding downstream 44252 10550268 ~ 10552740 (+)
CI01000304_10555326_10571933 NA coding downstream 49200 10555216 ~ 10572164 (+)
G424376 NA non-coding upstream 249716 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 259775 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 281873 10219120 ~ 10221115 (+)
G424248 NA non-coding upstream 286133 10153444 ~ 10216855 (+)
G424547 NA non-coding downstream 26230 10532246 ~ 10543770 (+)
G424790 NA non-coding downstream 331169 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 344294 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 558502 11064518 ~ 11065557 (+)
G424251 NA other upstream 310093 10188822 ~ 10189404 (+)
G424246 NA other upstream 375666 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 937415 9561005 ~ 9565778 (+)
G423614 NA other upstream 1553566 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1830433 8671770 ~ 8672555 (+)
G425718 NA other downstream 1922689 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3050435 13578049 ~ 13595097 (+)
G426312 NA other downstream 3824032 14330048 ~ 14330886 (+)
G426828 NA other downstream 4442874 14948890 ~ 14950592 (+)

Expression


Co-expression Network