CI01000304_10541900_10546151


Basic Information

Item Value
gene id CI01000304_10541900_10546151
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10535842 ~ 10546209 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10541900_10546151.mRNA
ATTTAAATGCCTGATTGAACATACTCAATTAACTTCATTCTGTGTCAACCTCATTGTATTAATAAAGTTCAAAACTTTTCTTGAAGCCTTCTTGAGTGTTGCATATTTTAACCTTTAGATGCATTGATATAAGATCAATTTTGTTCTGCATTTCTGACCAACTAGTGCAAGAAGACACAAGCATAGGAGCCGATTTATGCAATGGAAGAATAGTCTTTAACCACAATTAAGGGTAACGCTTTATTTTGATGATCCACTTAAGACATTCTTAAGACATCCACTTAAGACAACCCGAAGCAATGGGTTTTTGTAAGAAAAATATCCATATTTAAAACTTTATTAACTATAATAACTAGCTTCAGGCAGACGGCCGTACACATTGATTTGCGGCAGAAGAGTGAACTCTGACCGCGACGCATGATGTAATGACGAACGTGGAAGCACAGAGGTTAGAGCAAAACAAAACACCGGTTACAAATTAAAAGTCTAAAACCAGAAATTTAAAAGAGAAATGTCAGAGGATTTCGATATAAGAGAAGAGGTGAAAAGCTTGAGTTTGTTGCACAGCCCTATTTGTTTAAACTGCGAGAGGTGTCTAAGCTTACGCTATTCCTACATCCTACGTCATACATCGCTACAGGGGTTACTCTTGTGACACAAGTTGACTTGCGCAGTATGCATACGGTCGTCTGCTGGAAGCTGGTTATTTTAGATTATGAAGTTTTAAATATGTATATTTTTCTTCCAAAAACCCATTGCTTCGCTTCAGAAGGCCGTTATTAACCACCTGGAGCCGTATGGATTATATTTATGCTGAATGGATGCATTTTTGGGGGGCTTCAAATCAGGCCTCCCGTTCACTACCATGATAAAACTTGGTAGAGCCAGGATATTTTTAAATATATCTCCGATTGTAGCCATCCTAGGTGTACACATAATACACCTAGGATGGCTTGAGGGTGAGTAAATCATGGGATAATTTTCATTTTTGGGTGAACTATCCCTTTTAAAGGGTTAGTTCACCCCAAAATGAAAATTCTGTAATTTATTACTCACCCTCATGTCGTTCCACACCCGTAAGACTTTCATTCATCTTCGGAAGACAAATGAAGATATTTCTGATGACAGAATGCGGTCAGATTTACTTCCATTGACTGCCTTTGTAACTACAACTTTGACGCTTCAAAAACTTCATAAAGAGATCGGAAAACTAATCCATATGAATCGAGTGGTCTAGTCCAAATTTTCTGAAGAGAATCGATCGTTTGTTATGATGAACAGATTTAATTAAGGTGAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAACATTCGAATTTGAAGTGATTATTTAACAACACTCCAAACTGCCTTCTTCATCTTTGCTGTGGTTTACAAGTCTGAGCTGGCAAATGTTTAAGGCTCAAATCCTGCAACCCATCTCCTACCATCATGTGACCTTTAGCCCCACCTAACCCCAAACTGCACCAACAGAAGTACAACAGAACAATTTAGATGAAAATTTGGGATGTGCAGAACTACATATTTTCATATCTCTGCAGGATTGTCTGAACGATAATTCATCTAAATTGTTTTATAATTATGGGTGATAAGACACATTTCAGACAGGCAGACAGACAGACATATAGATAGATAGATAGATAGATAGATAGACAGACAGACTCTAAAAGATCGAAAAAATCTACTAGAGGACTTGCGTCAATAGTAGCACTGAGATACGAGAACTGGACAGAAAAGATGTTGAGGTGATGATCACTGATGCCAACAGAGACACAACGAACCGACATGATGTCAGGACAGAAACAGAGAACTCAGACACCGCAACACATCAAACACTTCAACACTCAGGAAGTGTTTGTGTGAAGATCAGAAGCTCCAGAGCAGCTGCAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGACTGCAGTCATAGTGCTGGCCATCAAGCTCAGTAAAACGATTGATGAGTTTTACATCAAGTACAAAAACATCACAGAAGAGATAAATGAGTTAAATAACAGAAAATTAATCATGAAACAGAATACTACGATTTTATCAAATTATAATAAAACCCTGATTACAGAAAAATGGGCATTACAGAGCGAGATGAAAGAACTGTGGCAACAGATAGATGGATTGAAGTGCTATCAATCTAGTCTTTACTTCATCTCCACTGAGAAGAAGAACTGGACTGAGAGTAGGCGAGACTGTACAGAGAGAGGAGCAGATCTGATCATCATAAACAACAGAGAGGAACAAACAAAATTAAAGTTAGTCTTGACAAACTTTATCTTACAATCAGTATCATATCACACAGAAAGCAGCACTGAACATCTAATGCTGATCTGTTGCAGGTTCTGGAGGGATGGAGAACCAAGTGATAGCACTGGAATTGATTCTGTGAGGAACAGAAGATACAAAAGAGCTACAGTGTGTTTGGTGCTGCAGTGTGTTCTTCTGGTTGAGGCGATCATATTGCTGGGTCTCGAACTCAGAACAAAGACTGATGAGTATGAAAACAATGGATGGAAGTGCTATCAATCCAGTTTATACTACATTTCCTCTGACACGAAGAACTGGGCTGATAGTAGAGAAGACTGTTCGAACAGAGGAGCTGATCTGATCATCATAAACAGCAAAGAGGAACAAGAGTCTTTTAAAACTGATGCTGGGTTCTGGATTGGTCTGACTGACAGTGACATGGAAAACACATGGAAATGGGTTGATGGCAGCACATTGACCTCTGGGTTATGGGCGTCTGGAGAGCCCAGCATGGGCAAAGAGGAAGACTGTGCTGTGCTGTATCCATCAGGGTGGTATGATTATCAATGTAATAAGGATTTTAAATGGATGTGTGAGAGAAAAGCATCTTAAAATAAAATCTGTAATGTCATCGCTAATAGGAAGCAAAATAGCTGTACTTGTATTTGCA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10541900_10546151.mRNA False 2959 mRNA 0.38 8 10540127 10546209

Neighbor

gene id symbol gene type direction distance location
CI01000304_10528999_10530630 NA coding upstream 9280 10525290 ~ 10530847 (+)
CI01000304_10512196_10516865 NA coding upstream 23211 10511523 ~ 10516916 (+)
CI01000304_10504058_10505899 NA coding upstream 34111 10502988 ~ 10506016 (+)
CI01000304_10489464_10500854 NA coding upstream 38990 10489381 ~ 10501137 (+)
CI01000304_10473174_10473651 NA coding upstream 66402 10472092 ~ 10473725 (+)
CI01000304_10550477_10551812 NA coding downstream 4059 10550268 ~ 10552740 (+)
CI01000304_10555326_10571933 NA coding downstream 9007 10555216 ~ 10572164 (+)
CI01000304_10577811_10579298 NA coding downstream 31492 10577701 ~ 10580537 (+)
CI01000304_10586097_10589143 NA coding downstream 39139 10585348 ~ 10589608 (+)
CI01000304_10927170_10992558 NA coding downstream 380961 10927170 ~ 10992558 (+)
CI01000304_10451536_10470518 CD209 non-coding upstream 79459 10450410 ~ 10471255 (+)
G424376 NA non-coding upstream 286855 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 296914 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 319012 10219120 ~ 10221115 (+)
G424790 NA non-coding downstream 290976 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 304101 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 518309 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 520283 11066492 ~ 11072156 (+)
G425058 NA non-coding downstream 526120 11072329 ~ 11072732 (+)
G424251 NA other upstream 347232 10188822 ~ 10189404 (+)
G424246 NA other upstream 412805 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 974554 9561005 ~ 9565778 (+)
G423614 NA other upstream 1590705 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1867572 8671770 ~ 8672555 (+)
G425718 NA other downstream 1882496 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3010242 13578049 ~ 13595097 (+)
G426312 NA other downstream 3783839 14330048 ~ 14330886 (+)
G426828 NA other downstream 4402681 14948890 ~ 14950592 (+)

Expression


Co-expression Network