CI01000304_10555326_10571933


Basic Information

Item Value
gene id CI01000304_10555326_10571933
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10555216 ~ 10572164 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10555326_10571933.mRNA
TTATATAAGCAGACAGGATATGACTGCTCAGTGCGGTCACAGTGGTGTAGGTAAAGTTCAGCTTCTAAAAGCATCAGTACACAGCAGCGTCCACACGAGCAACTTACACAATGGACTCCAAAAGACCGAAAACCTTCAAGAGGACTCGCGTCAATAGTAGCACTGAGATACGAGAACTGGACAGAGAAGATGGTGAGGAGATGATCACTGATGCCAACAGAGACACAACGAACCGACATGATGTCAGGACAGAAACAGAGAACTCAGACACCCCAACCCATCGAACACTTCAACACTCAGAAATGGCTAGTGTGAGGAACAGAAGCTCCAGAGCAGCTCCAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGACTGCAGTCATAGTGCTGGGTGTCCAACTCTCTACAAACAACAGCACAAACTACACAGAAGAGAGAAATGAGCTACTAACTAACATCACCAACCTCACAGAAGAGAGAGACCAGCTACTAAACAAGATTACTAACCTGACAGAAGAAAGAGATGGGCTAATAATAAAGAACAAAAACCTGAATGAGAGAGACCAGCTAAGAAATGAACTTCAGATTTGTGTCTGGATTGGTCTGACTGACAGTGATGTGGAGGGCACATGGAAATGGGTTGATGGCACCAACATGACCTCTGGGTCCTGGGCGTCTAAAGAGCCTAATGGAGGTACAAGAGAGAACTGTGTTGTGACTGTGGCTGTGCCTAAATTGCCAGAGTGGCCTGGTTTACTAATGGCCGTTAAATTAAGCACTTGCAGTAAATTTACAGTATTTAAGAGTAAATCGAGCAAAACGGTCTTGCACTGTAAAAAGCAGCACATAGGGGCAGGGTATCTTCAACACGAGCCCTTGTTGTCTCCAGAGTGCAGAAAGCAAGCGGTCAACGGAATCTCTTCAAAACTCTTACCGTCTGCGTCTGCTAAAGAAGAAAACTGCTCAAGGTTATGGGCGTCTGGAGAGCCCAGCATGGGCAAAGAGGAAAACTGTGCTGTGCTGTATCCATCAGGGTGGTATGACTATCAATGTAATAATGTTTTTAAATGGATATGTGAGAGAAAAGCATCTTAAAATAAAATCTGTAATGTCATCGCTAATAGGAAGCAAAATAGCTGTACTTGTATTTGCAAAAATATATAGTTTTTTGTAAGCTACAAGTCCTGTAATAAATTATCTTCATTATTAGATTATTTAGAAAATTATAATTTTTTTTTTCCTGTTATATTTTATTGTTGTGCAGCTTCTCTGTGGTTCTCTGTTGTTTTAATATGTATAGGCTAGAAGCATTACTCAACATTTATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10555326_10571933.mRNA False 1328 mRNA 0.42 6 10555216 10572164

Neighbor

gene id symbol gene type direction distance location
CI01000304_10550477_10551812 NA coding upstream 2476 10550268 ~ 10552740 (+)
CI01000304_10541900_10546151 NA coding upstream 9007 10535842 ~ 10546209 (+)
CI01000304_10528999_10530630 NA coding upstream 24369 10525290 ~ 10530847 (+)
CI01000304_10512196_10516865 NA coding upstream 38300 10511523 ~ 10516916 (+)
CI01000304_10504058_10505899 NA coding upstream 49200 10502988 ~ 10506016 (+)
CI01000304_10577811_10579298 NA coding downstream 5537 10577701 ~ 10580537 (+)
CI01000304_10586097_10589143 NA coding downstream 13184 10585348 ~ 10589608 (+)
CI01000304_10927170_10992558 NA coding downstream 355006 10927170 ~ 10992558 (+)
CI01000304_11011297_11032025 NA coding downstream 437414 11009578 ~ 11032086 (+)
CI01000304_11140964_11155540 PAXBP1 coding downstream 568800 11140964 ~ 11155892 (+)
CI01000304_10451536_10470518 CD209 non-coding upstream 94548 10450410 ~ 10471255 (+)
G424376 NA non-coding upstream 301944 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 312003 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 334101 10219120 ~ 10221115 (+)
G424790 NA non-coding downstream 265021 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 278146 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 492354 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 494328 11066492 ~ 11072156 (+)
G425058 NA non-coding downstream 500165 11072329 ~ 11072732 (+)
G424251 NA other upstream 362321 10188822 ~ 10189404 (+)
G424246 NA other upstream 427894 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 989643 9561005 ~ 9565778 (+)
G423614 NA other upstream 1605794 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1882661 8671770 ~ 8672555 (+)
G425718 NA other downstream 1856541 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2984287 13578049 ~ 13595097 (+)
G426312 NA other downstream 3757884 14330048 ~ 14330886 (+)
G426828 NA other downstream 4376726 14948890 ~ 14950592 (+)
G427860 NA other downstream 5313290 15885454 ~ 15889591 (+)

Expression


Co-expression Network