CI01000304_10577811_10579298


Basic Information

Item Value
gene id CI01000304_10577811_10579298
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10577701 ~ 10580537 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10577811_10579298.mRNA
TTATATAAGCAGACAGGATATGACTGCTCAGTGCGGTCACAGTGGTGTAGGTAAAGTTCAGCTTCTAAAAGCATCAGTACACAGCAGCATCCACACGAGCAACTTACACAATGGACTCCAAAAGACCGAAAACCTTCAAGAGGACTCGCGTCAATAGTAGCACTGAGATACGAGAACTGGATAGAGAAGATGGTGAGGAGATGATCACTGATGCCAACAGAGACACAACGAACCGTCATGATGTCAGGACAGAAACAGAGAACTCAGACACCCCAACCCATCGAACACTTCAACACTCAGGAAGTGTTTGTGTGAAGATCAGAAGCTCCAGAGCAGCTGCAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGACTGCAGTCATAGTGCTGGCCATCAAGCTCAGTAAAACGATTGATGAGTTTTACATCAAGTACAAAAACATCACAGAAGAGATAAATGGGTTAAATAACAGAAAATTAATCTTGGAAAATAATAATACAAATTTATCAGATTATAATAAAACCCTGATTACAGAAAAATGGACATTACAGGAAGAGACGGAAGAACTGAGGCAACAGATACATAATTTGGCTGGATGGTCTTGCTATCGATCTAGTCTTTACTACATATCCAATAAGACGAAGAGCTGGACTAAGAGCAGACGATACTGTACAGAGAGAGGAGCAGATCTGATCACCATAAACAACAGAGAGGAACAAGATTTTGTTAATAACATGTCTGGTGCTGCTGTAGTCTGGATTGGTCTGACTGACAGTGATGTGGAGGGCACATGGAAATGGGTTGATGGCAGCGCACTGACCTCTGGGTTCTGGGCGTCTAAAGAGCCTAATGGAGGTACAAGAGAGAACTGTGTTGTGACTGTGGCTGTGCCTAAATTGCCAGAGTGGCCTGGTTTAGTAGGATGGCTAGATGAATCATGTAATAACGCTTATCAATGGATCTGTGAGAAGAATATTTCACAACTCATACTGCCATAGGAACATCACACATCTTTTTTGATGCAAGTTTAACAGTACAAAACTTCTGTAATAATTGATTATCATCTAAAGCAGTGTTTCTCAACCTTGCTCCCGGAGGACACCCACAACGGCACATAGGGCTGTGCAATTAATCGTATTTTCAATTTCAATTTCGATTTTGGCTTTCAATGATTATGAAAACAAGATAATCGAGGTAAAATTATTACTGTACCGCTGCCGCATTCCATCCAACGCAACTTTCTTTCTTTCACAGCAGTGCGCTTTCATTTCTCACTAACCAAAATGTAACATCCAAATCAGCCGAATAAGAGAGTGAAAAACTTAAAGCCCTGCTTATTTCATTTGTTTGTAATTAGTTTCTTTGTTCTTATTTTATTGTTGACTGTTTACTTGTCCTCTGTAGCTGTTTTGATGACTTTTTACATACATTAATTAACCTAGTATTTGTTTTTGCTATAGTACGGATAATTGTGAAATTTCATTGACATTTAAAATGACTCATATCATGAAATAAGATTTTGATCATATCACCCACCAATAATCGTGTTGAATAATCGTGATTTTAGTATTGATCAAAATAATCATGATTATGATTTTTGCCGTAATTGAGCAGCACTAATGGCACATTTTGAATGTTTCCTTTATCAGACACCCATTTCATGTCCTGGAGTTTCTTGTAATGAGTCAGGTGTGTTAGGGAGACATATATAATATTATAATATAATATAATATAATATAATATAATATAATATATTATATTATATTATATTATATTATATTATATATATATATATATATATATATACACAGACACACACATACATATATAATTTACTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCTATTGCCAAGGTGGTGTGTGGGTTGTTATAATGGGTTCTATATATATATATATATATATATATATATATATATATATATATAGTTGTACTTGTATGTACTTTTAAGCTAGTTTATTCTACAAGTTCTACTGTAAATAATCATCTTTATTATTAAATCAATTGACAAAATAATCTGTCCCTATTATATTTTATTGTTGCATGTGTGCAGCTTCTCAACAGTTTTCTGCAGTTTTAATACGTATAGGCTAGAAGTACTACTCGACATTCATA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10577811_10579298.mRNA False 2240 mRNA 0.34 5 10577701 10580537

Neighbor

gene id symbol gene type direction distance location
CI01000304_10555326_10571933 NA coding upstream 5537 10555216 ~ 10572164 (+)
CI01000304_10550477_10551812 NA coding upstream 24961 10550268 ~ 10552740 (+)
CI01000304_10541900_10546151 NA coding upstream 31492 10535842 ~ 10546209 (+)
CI01000304_10528999_10530630 NA coding upstream 46854 10525290 ~ 10530847 (+)
CI01000304_10512196_10516865 NA coding upstream 60785 10511523 ~ 10516916 (+)
CI01000304_10586097_10589143 NA coding downstream 4811 10585348 ~ 10589608 (+)
CI01000304_10927170_10992558 NA coding downstream 346633 10927170 ~ 10992558 (+)
CI01000304_11011297_11032025 NA coding downstream 429041 11009578 ~ 11032086 (+)
CI01000304_11140964_11155540 PAXBP1 coding downstream 560427 11140964 ~ 11155892 (+)
CI01000304_11170412_11182604 SLC7A1 coding downstream 589329 11169866 ~ 11182641 (+)
CI01000304_10451536_10470518 CD209 non-coding upstream 117033 10450410 ~ 10471255 (+)
G424376 NA non-coding upstream 324429 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 334488 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 356586 10219120 ~ 10221115 (+)
G424790 NA non-coding downstream 256648 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 269773 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 483981 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 485955 11066492 ~ 11072156 (+)
G425058 NA non-coding downstream 491792 11072329 ~ 11072732 (+)
G424251 NA other upstream 384806 10188822 ~ 10189404 (+)
G424246 NA other upstream 450379 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 1012128 9561005 ~ 9565778 (+)
G423614 NA other upstream 1628279 8949036 ~ 8949422 (+)
G425718 NA other downstream 1848168 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2975914 13578049 ~ 13595097 (+)
G426312 NA other downstream 3749511 14330048 ~ 14330886 (+)
G426828 NA other downstream 4368353 14948890 ~ 14950592 (+)
G427860 NA other downstream 5304917 15885454 ~ 15889591 (+)

Expression


Co-expression Network