CI01000304_10586097_10589143


Basic Information

Item Value
gene id CI01000304_10586097_10589143
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10585348 ~ 10589608 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10586097_10589143.mRNA
CTATAAATAGAATAAGAATATGAAAGCAGTATTGAGAATGTAAAACAATGTTTTAAGTCAGTTTATATATAATATAATATAATAGCTTTAGAAATGGTAAATGTGGTGTAGAAATAAAATTGCAAAAAAAAAAAAAAATGAAGGCCATGATGATCCGACTTGATTATAGCCCAAAAAAAACAACGTCGAAATGACGTCTGGTGCTGGATGGGATGTGGTGACATATTCACATGTGGTGACATGTTATTCACATGTGAACATATGTGGTGACATATTCATATGTGATGACTTATTCACATGTGATGACATATTCACATGTGAACATATGTGGTGACATGTGGTGACGTATTCACAGGTGATGACTTATTCACATGTGAACATATGTGGCGACATGTCCACATGTCGTCCACATGTGATCACGTGAAATTATAAATTGGGTGCCCTTGTTCACCATACTAAATGCTATTTCTTAACTAATGTGTTTGTTATACAAAGATTGTAAATGCAGTGAAGGAGTGCATTTATATAAGAGCAACTTTTCATAATAATCTGTAGTAACGTACAAGAAAAGTTATTTGTCAGCACATTTTTTAGCATCCTAACAGGATATCACATGTTCTTGACCACAAGGGGTTTAAAATTGAAAGCTCAAATGCAGAAGTTCAGAACAGTGCAGACCATTTGAAGTAACAGCTTCTAATAATCTCACATTGAACTCCAGCAGACTGAATACGTCATCTTATGGCAAAATGAACATTCCTGGGAAACATAGGATGGACAGAGAAGATGAAAAAGAGATGAATATCTATGCTAATGCTGATCCTATAAACAGTTTTGATGTCAGGACAGAAACAGAAAACTCAGACACCAAGAGACACCAAACTCCTCAACACACAGGAAGTGATAGTGTGAAGATCAGAAGCTCCAGAGCAGCTCTAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGATCGCAGTCATAGTGCTGGGTGTCCAACTCTCTACAAACAACAGCACAAACTACACAGAAGAGAGAAATGAGCTACTAACCAACAATACCAACCTTACTGAGGAGAGAGATCAGTTACTAACCAGGAACATGCAATTGACAAAAGAGAGAGATGGATTATCATCAAATAACCAGGACCTGATTAAACAAAGGGACCAGTTAAATAAGGAGAAAACTGAACTATCGAAAATGGATGGATGGATTTATTATCAATCCAGTTTTTACTTCATTTCCTCTGAGAGCAAGAGCTGGACTGAGAGCAGAAGATACTGTACAGAGAGAGGAGCAGATCTGATCATCATAAACAACACAGAGGAACAAGATTTTATTATGAAAATGTCATGTAGTAAGGCTGCCTGGATTGGTCTGACTGACAGTGATGTGGAGGGCACATGGAAATGGGTTGATGGCAGCACATTGACCTCTGGGTTCTGGGCATCTGGTGAGCCTAATAGCTACAAAGGAAAAGATGAAGACTGTGCTTTATCTCATTCATCAGGATGGGCTGATTTTCCATGCAATGATCATTTTTTGATTATCTGTGAGAAGAAAATTTTTAATTCAGTCAATTAAGTCAGGTTTATGTCAAAAAATACATAGAGTTTACTACTAAGTTATTTTTTTTAAAAAAAATTTTAATTTAGAATTGCAACTGTCGGAAAACAGTTGTGGTTGTGATTAGGGGTGTGCAATATCATGATTTTTGACCGTGAATGATTAAAATGTCCCCATGATCAGCTTTTAAAGAAATATTGTATCCTGCTATAGTGCACCTCCATCCTATCATACTGTAAAACGCGAAGTACATTCATGTCACATTAACGCAGAGGTAGGATAATGCTCAAGTGACATTGCAGTTATTCACAGTCATGAAAGTTTATTATTTGCATGCATTTTAAAGCCTTGCTGCCGCTTGTCATTAATGTTAATAAAAAACAACAACAACAAAAGACAGAGTAAATTATTTAGTGCTCTTCACTGAATAACTTCAGTAGCTTTAATAAGAATTAGAAGAAAAAATGTATCATAATCAAAAAA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10586097_10589143.mRNA True 2048 mRNA 0.36 5 10585348 10589608

Neighbor

gene id symbol gene type direction distance location
CI01000304_10577811_10579298 NA coding upstream 4811 10577701 ~ 10580537 (+)
CI01000304_10555326_10571933 NA coding upstream 13184 10555216 ~ 10572164 (+)
CI01000304_10550477_10551812 NA coding upstream 32608 10550268 ~ 10552740 (+)
CI01000304_10541900_10546151 NA coding upstream 39139 10535842 ~ 10546209 (+)
CI01000304_10528999_10530630 NA coding upstream 54501 10525290 ~ 10530847 (+)
CI01000304_10927170_10992558 NA coding downstream 337562 10927170 ~ 10992558 (+)
CI01000304_11011297_11032025 NA coding downstream 419970 11009578 ~ 11032086 (+)
CI01000304_11140964_11155540 PAXBP1 coding downstream 551356 11140964 ~ 11155892 (+)
CI01000304_11170412_11182604 SLC7A1 coding downstream 580258 11169866 ~ 11182641 (+)
CI01000304_11215537_11253484 MTUS2A coding downstream 625329 11214937 ~ 11253581 (+)
G424547 NA non-coding upstream 7095 10532246 ~ 10543770 (+)
CI01000304_10451536_10470518 CD209 non-coding upstream 124680 10450410 ~ 10471255 (+)
G424376 NA non-coding upstream 332076 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 342135 10242979 ~ 10243213 (+)
G424790 NA non-coding downstream 247577 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 260702 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 474910 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 476884 11066492 ~ 11072156 (+)
G425058 NA non-coding downstream 482721 11072329 ~ 11072732 (+)
G424251 NA other upstream 392453 10188822 ~ 10189404 (+)
G424246 NA other upstream 458026 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 1019775 9561005 ~ 9565778 (+)
G423614 NA other upstream 1635926 8949036 ~ 8949422 (+)
G425718 NA other downstream 1839097 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2966843 13578049 ~ 13595097 (+)
G426312 NA other downstream 3740440 14330048 ~ 14330886 (+)
G426828 NA other downstream 4359282 14948890 ~ 14950592 (+)
G427860 NA other downstream 5295846 15885454 ~ 15889591 (+)

Expression


Co-expression Network