CI01000304_10812673_10812980


Basic Information

Item Value
gene id CI01000304_10812673_10812980
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10812533 ~ 10815238 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10812673_10812980.mRNA
AATCTCTCTTTCATATGAATGGTTGGTTAAATCATCATTTGCCTCTTTTAAGTTCTCCTCAGCTCAATGAATGAGATAAAACTGCTGCCACTGTGTGATATAAAATATATTACATAATATTAAGATCTGACATTTCATTTCCACTCAAGGGAGCATGTCTCGACAAGACCTACAAATACTGAGTGTGTGTGTGTTTAGTGGAGATCGGGGAAAGTTGTCACATGGGCTATATCTTAGTAAGGTTTTGAGCCAAATGTCCAATTACACAAATGGTTTCTTTAGCAGTCATTTTTTTCCCCTTCAAAGATCTAGTTCAAAACCCTGTTAAAGCTGCAGTCCGTAATTTTGCCTCTGTCGCCATCCCTGTTTGAAACCTGCAATTGCAGTCCGTAATTTTGCCTCTTTGTCGCCATCTCTGTTTGAAACCTGCAATTGCAGTTGTTTGCGGAATTATCATCTTTATATGTGCCTCGGCGCGGCTCCTAAGTGCGGATGAATCTAATGTTTGCTGCCAATCACCACATCGGTGTGGATTCTGTACTTCGGAATCACAGACTGTAGTCTTGGAAGTATGACCAAAATAAGAAGTTTCACCGGAGAATGTCGTCTGAACAAGTAAGAACACTTTTGTTCTGACCAACTGAGGGAAAAAAAGCATTACAGTAAATTGCGCTGCCAATGGTGATTAAATCTAATGATCACTTAGCTCATATCACGTCAAACTGTGCAAATTATTATTATTGTTATACTTTGTTCTCAAATTGTTAATGTTAACTACATCAGCATTGCGTATATGTATTTAGTGTGCTTTAGCCTAGCGTTACCTGTAGATTTCAATTTCTGTACACTCTAATCTCTAATGTTAATTTGTCATATCATACAATCCGCCATCAAAATAATAAGTTTAATTATTGCAGCTGCTCTGAGAAAAGGCTGTAAATAATCTGCGTCATATGCCATATAGCCTACTAGCTGGGACTCATCCTTTATGTATACAGACGTGACGCAATGACGCAAAGACAAACGGCTGCATGCTCGAATTTCCTGGTGAAACCCACCAGTACCACCCGAATTATAAAACATGATTACAAGCTTACCGTTGTGAATCGGGCTAAGGTAAGGAGATAGTTTTGAACACTGGCTGGTTATGTACCTGCTCAAAAATTGATTTTGGATCATTTTTAACCATAAAATGTTACGGACAGCAACAATTTGCATATTTAGGCAACGGTCAACTACATGATACTAGTGTGATTGTAACTTAAAACTTGAACTGTGCTTTCAGGACAGTTATTTTTTCAGTTATTTATATTTACTAATAGATTTTGGCAAAATAATAGCAATAATAATAATAATAATAATAATAATAAATATTTTTGTATGATACATACTGTACAATTTGGTGTATTATTTAAATGTTGATGTAAAGATAATGGCAGGATCAATTGTGGCAACTTACCCCTTAATGTGATTTATGATTTATTAAAAAGATGACAACAATTAAGCTGACTTCATATCAAACATATCGTTATTTTTTTTTCAGTGAAACCGGTAGGCAGTCATCTTTGCTGGATTGATAATGTACAGAATGACGACGATGCAATATTATCCGCCTAGTGGTTTGTATCAGTAGTAAAACTGTGTGCACAGTCATGTCTATTTGATCCCGGTGAGAGGTGCGCTGCTTGTAGATCCCACGGTAGCTGTCCATTCAGGACTGCTGTACAGTACGTGTAATGAAATCCACAAGAAAACGTGCCTAAATCATCATTAGCCCACCCATATCAGAATAATTTCATTACGCAATGCGTTACAACGAGACAGGGGACAATCAGTGCCATTGCACGCACTCGCATTATATTTCCCCGTTCTTTTAATCATACAGACTGTGGAGTCGAGAACCAGTTTGATCGAAGAATAATTCCAGGCGCGCGCTATTGGCTCCCCGTCCTCATCTGTCAATCTGCGGAGGCGGGACTCTGCCTGCTCGCGCTCCCAGGAGGCGATAGATGCGCGAGCTGTACTTTTCTACTGTGTTGGAGCGCTTCGCACTTCTCGAGCTCAGTCCGAGCGTCAATTGAACGGCGTGCGGAAAGCGCAGTGGGACTTCAACCGAGGAGAAGTTATCGAAGGAGCCTGTAGTATTGATTGCAGCAGTCTGCACCTGGATAAGCCCCCATCATCAGCGCGCGGAGAAGCGAAAGAGCGAAGAAAGTGTGTTGACGGCAAGCGGGCAGCTGTTATAGAAGGAAGGCAATATGATGGTGAAGCAGCATATGCTGTTTACCCTGTACAGCATCTGCGGGATCGTCCTTAAAGGGCCTCGAGTGAGTACGGGGAACAGTTTCCCGTTAGTCATCATTGCTCTGAAGGAATTGTGCGGTGCACGTTTGCCCAACACTGATACAGAATCTTATCACGGATAAGCCTGCACACACTGCTGAGCTAGAGCCCCGCTTGTATGGATTACCAGTCAAAATGTGTTATAGACAAACTCATCACCATAGAGGGAATATGATTTAATTGATACAGCCTTTGCATAACCTGATCGGAAACTTTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10812673_10812980.mRNA False 2566 mRNA 0.41 2 10812533 10815238

Neighbor

gene id symbol gene type direction distance location
CI01000304_10350748_10388571 CADM2A coding downstream 423931 10349869 ~ 10388602 (-)
CI01000304_10284509_10291314 NLE1, NLE1.S coding downstream 521219 10284509 ~ 10291314 (-)
CI01000304_10220812_10226103 NA coding downstream 586430 10219589 ~ 10226103 (-)
CI01000304_10209150_10210418 NA coding downstream 601642 10208635 ~ 10210891 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK coding downstream 620176 10190574 ~ 10192357 (-)
CI01000304_11065581_11077156 NA coding upstream 250001 11065239 ~ 11077156 (-)
CI01000304_11083948_11091592 PITPNAB, PITPNA coding upstream 268600 11083838 ~ 11091592 (-)
CI01000304_11110559_11121354 SLC43A2B coding upstream 295225 11110463 ~ 11122171 (-)
CI01000304_11124801_11135838 NA coding upstream 308919 11124157 ~ 11137342 (-)
CI01000304_11272501_11275583 STOM, STOML3B, STOML3 coding upstream 456986 11272224 ~ 11275583 (-)
G424892 NA non-coding downstream 27276 10778756 ~ 10785257 (-)
G424891 NA non-coding downstream 88625 10713964 ~ 10723908 (-)
G424806 NA non-coding downstream 232521 10565628 ~ 10580012 (-)
G424813 NA non-coding downstream 247801 10452461 ~ 10564732 (-)
G424810 NA non-coding downstream 251151 10547680 ~ 10561382 (-)
G424907 NA non-coding upstream 33963 10849201 ~ 10849483 (-)
G424932 NA non-coding upstream 83869 10899107 ~ 10899901 (-)
G425104 NA non-coding upstream 119143 10934381 ~ 11001594 (-)
G425126 NA non-coding upstream 322139 11137377 ~ 11137710 (-)
G425167 NA non-coding upstream 324676 11139914 ~ 11140117 (-)
G424808 NA other downstream 269868 10444355 ~ 10542665 (-)
CI01000304_10160458_10161768 VAMP2 other downstream 648203 10160458 ~ 10163762 (-)
CI01000304_09737662_09738777 NA other downstream 1073062 9736746 ~ 9738777 (-)
CI01000304_09566730_09575706 NA other downstream 1243499 9566730 ~ 9575706 (-)
CI01000304_11338304_11348212 ILK other upstream 531782 11338019 ~ 11348212 (-)
G425580 NA other upstream 1053439 11868677 ~ 11872906 (-)
G426106 NA other upstream 1521463 12336701 ~ 12340228 (-)
CI01000304_12559311_12559998 NA other upstream 1743616 12558854 ~ 12560135 (-)
G426147 NA other upstream 1880760 12719497 ~ 12805926 (-)
G424817 NA non-coding downstream 102464 10433180 ~ 10491120 (-)
G424831 NA non-coding downstream 274553 10318730 ~ 10319031 (-)

Expression


Co-expression Network