CI01000304_11011297_11032025


Basic Information

Item Value
gene id CI01000304_11011297_11032025
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11009578 ~ 11032086 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_11011297_11032025.mRNA
ATATTTAAACCAGGGCTTGGATAACCAGTCTCATGATTGACATAGCAAACTTTTCACCTGGTTACATTAGTTTAGTCTGTTTTGCTTTTTTGTAGGTGGTGTCCCAGGCTGACCAACTGACAAGTGCCTAAAACCCCTTTAAAACCAGCTAAACATACTAACTTTGCCAGCTTGACTACGTAGGGAAGCTGATCTTCAGATGGTTTAACTGGTTTCCAATAGTGTTGTAGTACTCGAGACCAGTCTTAAGACCATTTTTTGAAAGTCTTGGTCTTGTCTTGGTCTTTGAACCGAGCCCGAGTGCGATTGTCCCCCCTCCCCACTCCGCCGCTGGCCCGCACTCATATTGCACTAACGTTCCGGGCCGGAGCACGCTTACATCATATACAATGCAACTTTTTGAATGGAAGAAAACAGGAAGAAAAGCACTTTCGCTAAGATAATGCCTAATATATTTATCATTTATGCTGCGCAGCAATTTTCACTTGCACGTTTCAGAGGATTATTACAAAGGCAGCTGACGTTAATGGAGGAATTTGCGGCTTTACTCGCAAACTACAATTCCTGTTCATCAATAGTGAGATCCAGATCCGTTATAAACCCAAATACACTCAAATGAATTAAATGAATTGATAAGTGTACTATCAGAGTAGTAATAAAGTTTGCTGTCGTAATGATGACAGTAGCGCACACAAAAGTAGTAGCTGTTCCGTGCTCAGGCACGGTTAGCACTCACACTGCATGCGAACTGCGCTCGAGCCCAACTGAACCGCGCTCTGGCCCACCTCTTCCAAGCTTAAATCTTATGTTATAATATGACATTTTATATTATAACATATGATATAATTAAGCAATATCACAAGAAAGAGGCAAATGTGATACTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACACAAATGTTCACAAAACTGTATTTTTAAAACATTAATCTCAACATTATTTATGCATTTGTAATTGTAACAATTCAGATGCAACTTCTGTTCCACCTCTGCAGTGTAAAGATGAATTTTGTTTCAATTGATTGGTAACAGCTCTATATAATGTCTTTTATTATTCTAATTGTAATCATTGATTAAAAATAAGACATTTCTCAGGCAGTAAATGTGGATCTTTCAGAAGAATTTGAGGAGTGCTAGTCTGGTCTTGGTCTTGACTCTGTCTCAACTTGGTCTTGGTCTTGGTCTTGTCTTGGTCTCGACACACACTGGTCTTTGCCTCGACTTGGTCTCGGTTTAGGTGGTCTTGACTACAACACTAGTTTCCAAGAGACCAGTGGCTGACCAGCAGACAAATGGCCAAAACCCCTGTAAAACTGGCATATCAGACCAGCCTAGCCAGTTTGGCCTTGCAGTGAAGCTGGTCTTCATATGGTCAAACTGGTCTCCAAGAGACCAGTGGGTGACCAGCAGACAAATGGTCAAAACTCCCCTAAAACTGGCAAAACATACCAGCCTAACCAGTTTGGCCACGCTAGGAGACCAGCTAACCTCTTTAGGCTGGTTTATAGCAGTTTTTTTTCCCCCACAAGGTTAATCCAGGGAACATTATTTTGAAGTATTAACTTTGTCTATTGCTGTCTCTCCCTTTCTCTCAGTTTGTCCTCACCCCTCACCTTATACTTCCAAACAAACGTCAGCCTCCCGACTTGATATCAGTATGCTCTGAAATGTTTATAAAATAAAATGATGTGCCAAATGAATATGCTCATCTGGGGAAAAAACATCCCGAGGGTGCCAGACTCGCTCTACTATCCAGCTGTGCTCATTGACCCTTGGCCACTCAAATCGTGTCCGATCAACACAGAGCACTTGCAAGCTAGAAACAGTTTAGTCCTGAAGGAAATTCGGGACGAGGACTGGGATATGGGGAACATTGTTTACACCCTGACCAACAGAAGGAGAGGGGAGGCATCTGTCACTTATGCTGAGAGCCATGACCAGGCGTTGGTTGGGGACAAGTCACTGGCATTTTGGCTGATGGACAAAGAGATGTACACCAACATGAGTGCTCTCATTGCCATGACTCCTGTTATAGACCGTGGCATCCAGCTGCATAAACTCATCCGTCTCCTCACTCACAGTCTGGGAGGGGAGGGCTACCTCAACTTCATGGGAACTAGAGAACTGATCAGAAATCGTTACGCCTGTCTGCCTCTGCTGTTTGTTATTACAACCATCATGTGGAGAGCAGTGGACGTCCCTTATCATTGTGTCTGTATTCAGCGCATGGGGCGGTACGATAAGGCACATGACGGAGGTGACAGGGGCCGTAACGAGTTCGGTCATCCAGAATGGCTTGACTTTCCTAGGAAAGGAAACAACGAGAGCTACTATTATGCCCGTCGCCAGTTCAACCTTGTGGACATTGAGCATCTGCGATACCGACAACTATACGCTTTCGACCGTGACATGAATCTTACAGAAGACAAATACGGCTGGCTGGCTGCCGGTCAGGCGGCAGTCACGACTTTGAATCAAGCTGATAAGGTGATCGTATTTGAACGCGCAAACCTGCTGTTTATTTTCAACTTCCATCCCTGCAACAGCTACATTAACTACAGGGTGGCAGTGGAGCATGCTGGGAAGAGTGCGCTGAAGCGTTCGCTTTTGTTCTTCTGGGTGATCCACGTTGAATCTAACAAAGTTAACTTGAAGATAAAGTTGCCGGAAAAAGATGGGAAACGATGGTCTCAAAAGAGATTGAGCAAAGCAGTTCCAGACTTGAGCGAGCAACCCTTCATTATAGCAAACCCAGAGCAGAGGCCCTCGCCCACCCAGCAGCTCCGCTCATACCCCCTGGTCTCCTCTTCAGAGAACAAGGGCTGCGGGGAGCAGCCGGAGATGAGCTCCACCAGCTGAAGGCCTCCCACCAGGGCCTCTATTTAATCATGGCCCAGGCAGCGAGCCCGCTTGGCGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_11011297_11032025.mRNA True 2944 mRNA 0.45 10 11009578 11032086

Neighbor

gene id symbol gene type direction distance location
CI01000304_10927170_10992558 NA coding upstream 17020 10927170 ~ 10992558 (+)
CI01000304_10586097_10589143 NA coding upstream 419970 10585348 ~ 10589608 (+)
CI01000304_10577811_10579298 NA coding upstream 429041 10577701 ~ 10580537 (+)
CI01000304_10555326_10571933 NA coding upstream 437414 10555216 ~ 10572164 (+)
CI01000304_10550477_10551812 NA coding upstream 456838 10550268 ~ 10552740 (+)
CI01000304_11140964_11155540 PAXBP1 coding downstream 108878 11140964 ~ 11155892 (+)
CI01000304_11170412_11182604 SLC7A1 coding downstream 137780 11169866 ~ 11182641 (+)
CI01000304_11215537_11253484 MTUS2A coding downstream 182851 11214937 ~ 11253581 (+)
CI01000304_11264394_11268134 SLC46A3 coding downstream 232308 11264394 ~ 11268134 (+)
CI01000304_11288992_11297645 VPS36 coding downstream 256906 11288992 ~ 11298149 (+)
G424794 NA non-coding upstream 159003 10850310 ~ 10850575 (+)
G424790 NA non-coding upstream 172103 10837185 ~ 10837475 (+)
G424547 NA non-coding upstream 431325 10532246 ~ 10543770 (+)
CI01000304_10528999_10530630 NA non-coding upstream 478777 10525290 ~ 10530847 (+)
CI01000304_10451536_10470518 CD209 non-coding upstream 548910 10450410 ~ 10471255 (+)
G424936 NA non-coding downstream 32432 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 34406 11066492 ~ 11072156 (+)
G425058 NA non-coding downstream 40243 11072329 ~ 11072732 (+)
G425027 NA non-coding downstream 84034 11116120 ~ 11122174 (+)
G425073 NA non-coding downstream 105303 11137389 ~ 11137708 (+)
G424251 NA other upstream 816683 10188822 ~ 10189404 (+)
G424246 NA other upstream 882256 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 1444005 9561005 ~ 9565778 (+)
G423614 NA other upstream 2060156 8949036 ~ 8949422 (+)
G425718 NA other downstream 1396619 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2524365 13578049 ~ 13595097 (+)
G426312 NA other downstream 3297962 14330048 ~ 14330886 (+)
G426828 NA other downstream 3916804 14948890 ~ 14950592 (+)
G427860 NA other downstream 4853368 15885454 ~ 15889591 (+)

Expression


Co-expression Network