CI01000304_11318496_11322260


Basic Information

Item Value
gene id CI01000304_11318496_11322260
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11318436 ~ 11322489 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_11318496_11322260.mRNA
GTTTAAATAGAAAATATCCTTTTCTGGTTTGAGAAACAACAGCTGAATGAGCTCACCGCCATGACTAGACTCACACTTAAAAACCTGGGGCCTAATGTAACCGTGTACCCAGCTGTGGGGAATCACAACATCATTCCAGTGAATAGTTTCCCACCACCGTTTGTACATGGGAATCGTTCGTCCCGCTGGCTGTATGGCACTATGGCAAAGGAGTGGGCATCCTGGCTGCCTGAGGAAGCCCTGAAGACGATACGTGATGCTCGTACTGTGTCAACATGGTGTAGAAGCGACAAGGAAACATGTCTGTGAAGGAAGATCTGAATACCTCAGATGTCGTGAGTAATTTAGTAATTTTAAGTTATATTTTTGGTGATTTGTGCCAAAATAGGACAGTATGAGAGAGAAAGAAAGCAATGGAAGAGAAAAGAGGGGAACAGGATCAGGAGGGACCCTCTTCAACTGCGTGCAGTATGCTTAAACTTTACCTCAAGTCTAATGATTTTTTATTTTTTTTTTACATGTGTCAGATCAGGGACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_11318496_11322260.mRNA False 538 mRNA 0.43 3 11318436 11322489

Neighbor

gene id symbol gene type direction distance location
CI01000304_11308263_11317998 TPTE2, TPTE coding upstream 373 11307048 ~ 11318063 (+)
CI01000304_11301321_11304134 THSD1 coding upstream 14004 11300878 ~ 11304432 (+)
CI01000304_11288992_11297645 VPS36 coding upstream 20287 11288992 ~ 11298149 (+)
CI01000304_11264394_11268134 SLC46A3 coding upstream 50302 11264394 ~ 11268134 (+)
CI01000304_11215537_11253484 MTUS2A coding upstream 64855 11214937 ~ 11253581 (+)
CI01000304_11323923_11325889 NA coding downstream 1006 11322230 ~ 11325905 (+)
CI01000304_11449463_11453214 NA coding downstream 126477 11448966 ~ 11453315 (+)
CI01000304_11570457_11574856 CHORDC1 coding downstream 247968 11570457 ~ 11575290 (+)
CI01000304_11582257_11610398 GRM5, GRM5A coding downstream 259319 11581808 ~ 11610611 (+)
CI01000304_11613446_11620345 RAB38 coding downstream 290957 11613446 ~ 11620563 (+)
G425044 NA non-coding upstream 37229 11280963 ~ 11281207 (+)
G425081 NA non-coding upstream 37569 11280527 ~ 11280867 (+)
G425048 NA non-coding upstream 109411 11192185 ~ 11209025 (+)
G425073 NA non-coding upstream 180728 11137389 ~ 11137708 (+)
G425027 NA non-coding upstream 196262 11116120 ~ 11122174 (+)
G425030 NA non-coding downstream 7179 11329668 ~ 11338444 (+)
G425036 NA non-coding downstream 24790 11347279 ~ 11355129 (+)
G425049 NA non-coding downstream 25564 11348053 ~ 11350064 (+)
G425273 NA non-coding downstream 110291 11432780 ~ 11433041 (+)
G425277 NA non-coding downstream 113181 11435670 ~ 11446373 (+)
CI01000304_10555326_10571933 NA other upstream 762732 10555216 ~ 10572164 (+)
G424251 NA other upstream 1125541 10188822 ~ 10189404 (+)
G424246 NA other upstream 1191114 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 1752863 9561005 ~ 9565778 (+)
G423614 NA other upstream 2369014 8949036 ~ 8949422 (+)
G425718 NA other downstream 1106216 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2233962 13578049 ~ 13595097 (+)
G426312 NA other downstream 3007559 14330048 ~ 14330886 (+)
G426828 NA other downstream 3626401 14948890 ~ 14950592 (+)
G427860 NA other downstream 4562965 15885454 ~ 15889591 (+)

Expression


Co-expression Network