CI01000304_11359135_11362408


Basic Information

Item Value
gene id CI01000304_11359135_11362408
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11358917 ~ 11362408 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_11359135_11362408.mRNA
ATGGCCTTTGTTATGTTGCAATTTAACCTGGATGCCAAAATGAGTCAAGGTACAGTCCAGCAGGGGGATGTGTCCTACGCCTCTCTGGATCTGACTGTCAATAAGAAGCGTAAGAAAAAGAGAAAATACCAAAAACAGCCTCAAGCTCATCAGGCCCAGACGCATCCACAACCTGCATCCCAGCAGAACGGCACGGACCAGGATAATGAGGCTGATGTCACCCTCCCGTCTCGGAGCAGCAGCCTCATGGTTTCACGTCACAGTATCTACCTCAACAGTCATCAATTGCGGGACTTCCTCCTCGTTTACAATCGCATGACGGAAATCTGCTTCCAGCGATGCACAAGCAATTTCAACTACAGAAATCTGACAATGGATGAGGAGCGTTGTGCAGACAGTTGTGCTGGTAAATTAATAAGGACCAATCACCGTTTAATGGGCACATATGTGCAGTTGATGCCTGCGATGGTGCAGAAGCGGATGCAGGAGATGGAGAGCAAGGCTGCAGAAGTAGCTAAAGCTGAAGCTGCAGCGGCATTAGAAAACCCATCTACTGCCATCACAGACACATCAACAGTGTCTCCATCAACCCTGGGGATCCCTGCCGCATCCTCTCCAGTGGTGGGGATGCCTTTAACCACAACACCAGTGCTTGAAAGCCCACAGATACCTTCATCTCTCAATAATCCATCAGATATTAAGACATCATCATCAACAATTGGCTCAGCTTTTGGAGAAATGCAGTCAGAGGGACTAGTAGCACAATCAGCAGTGATCTCAACATCTTCTAGTGTACCTAAAGTAGGTGTAGGTCCCGTCTCAAGTGAAGAGGATAAACTCAATCTGAAGCCCAGCAGTGTAACATCCACATCAGTCCTTGAAACGCAGTCTGCAGCAGGACAGACGCCCCAAACTCCATCTTGATGGCGATGTGCAGAAAAGAGACATGGCAGAAATGATATGTCTAGGAGATATTGTTTATGTTGCATATTCAGTCTTAACAGCCAAATATCACAGACGCCTTTTATGACAGTTGATCAATTTCAGTGGAATTGACTTCATAAATATTTAAATACCTCTATTACAACATTGAATAATTATGTACTGCTGGCTAACATGTGAACTCTCTCTCTTTTAATAAA

Function

GO: NA

KEGG:

id description
K17779 TIM10B; mitochondrial import inner membrane translocase subunit TIM10B

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_11359135_11362408.mRNA True 1142 mRNA 0.45 4 11358917 11362408

Neighbor

gene id symbol gene type direction distance location
CI01000304_11338304_11348212 ILK coding downstream 10705 11338019 ~ 11348212 (-)
CI01000304_11330383_11335607 SMPD1 coding downstream 22797 11329642 ~ 11336120 (-)
CI01000304_11304660_11306789 NA coding downstream 52046 11304560 ~ 11306871 (-)
CI01000304_11282245_11288087 PROSER1 coding downstream 70830 11282141 ~ 11288087 (-)
CI01000304_11272501_11275583 STOM, STOML3B, STOML3 coding downstream 83334 11272224 ~ 11275583 (-)
CI01000304_11368905_11374145 NA coding upstream 6451 11368859 ~ 11374145 (-)
CI01000304_11445002_11447156 NA coding upstream 81323 11443731 ~ 11447156 (-)
CI01000304_11479874_11503083 MTNR1B, MTNR1BB coding upstream 117262 11479670 ~ 11503494 (-)
CI01000304_11526057_11569114 NA coding upstream 163591 11525999 ~ 11569114 (-)
CI01000304_11575414_11578638 NA coding upstream 212920 11575328 ~ 11578638 (-)
G425204 NA non-coding downstream 77713 11280976 ~ 11281204 (-)
G425230 NA non-coding downstream 88429 11269185 ~ 11270488 (-)
G425229 NA non-coding downstream 90468 11268197 ~ 11268449 (-)
G425228 NA non-coding downstream 91820 11266326 ~ 11267097 (-)
G425187 NA non-coding downstream 108706 11245182 ~ 11250211 (-)
G425269 NA non-coding upstream 67209 11429617 ~ 11430150 (-)
G425479 NA non-coding upstream 85219 11447627 ~ 11447954 (-)
G425517 NA non-coding upstream 216823 11579231 ~ 11579432 (-)
G425533 NA non-coding upstream 236481 11598889 ~ 11599266 (-)
G425559 NA non-coding upstream 309954 11672362 ~ 11672698 (-)
G424808 NA other downstream 816252 10444355 ~ 10542665 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other downstream 1166022 10190574 ~ 10192357 (-)
CI01000304_10160458_10161768 VAMP2 other downstream 1194587 10160458 ~ 10163762 (-)
CI01000304_09737662_09738777 NA other downstream 1619446 9736746 ~ 9738777 (-)
G425580 NA other upstream 506269 11868677 ~ 11872906 (-)
G426106 NA other upstream 974293 12336701 ~ 12340228 (-)
CI01000304_12559311_12559998 NA other upstream 1196446 12558854 ~ 12560135 (-)
G426147 NA other upstream 1333590 12719497 ~ 12805926 (-)
G427057 NA other upstream 2145233 13507641 ~ 13507922 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002777 timm10b coding NC_007121.7 CM002894.2 24762216 ~ 24765988 (-)