CI01000304_11368905_11374145


Basic Information

Item Value
gene id CI01000304_11368905_11374145
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11368859 ~ 11374145 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_11368905_11374145.mRNA
AGGCTCCAGCATCAGTGAAGATGTCACATCCATACAGATTCATAAAAGAGGGAGATGAAGTGAAAATAACTTGTTCAGCAAGTCCTCCACCACTCCGTTATAAACTTAGACGGTCAAAGGATAAGCTATTTCGTATGGAAAGCTTGAATGGAGAGTTCGTTTTACCAAACGTTACCAGAAACAACAGCGATCTGTACGTCTGTTTACCTGAATGGGAATCAGTTGTCCAAAATCAGCAAGGTCTCAATACCACAATGGAACTGACTGTGAATTTTCTTGATGACATTGAGTGTAACACAAGCAGCCCTTTAAACGTCAGTTTTGGTGAGGATGTGGCGATTTCTTGTATCGCAAAAGCATCTCAGCACTTGCAATATAAGTGGATGAGGGGTGACACAACACTGTCTCTCTCAGACACTTTGTCTCTGACTTCCATGACATCTAACCAGTCAGGAACATACAAACTGACAGCTGTCTTTCAGAACAACCAGCTCCAGAGAGACATGGAGTTTTCTATCCATGTTCTCTCAAAGCAAAGCGAAGAAAGAACCACCAAAAATCTGAGGAACTTTACCTCCATGGGGATGAGCTCATGGAAAACTGGTGCTATTGAGACAACAACAGAATCTGGACACTTCCTAACCAGCACATCAAAACCAAATGCTACTATGACAAACCTACAACCCAGAAACACCAGCCATCACACTCCTCTCACTGACAGCTCTTCTGCTCCACCTGTTGGCAATGCATCTACATTACATGCAACCACTGTAAAATCTACAGGCACCTCTTGTACAGAAAATCCAAGCACGAGTCCAGATCCAGTTACCGGAACAAAAATAGTTACCTCTGTTTTAACAAAGAAAAACATCACCACCAATGTGACATCATCGAAAGAGTCAAAAAGCACAGCATATATCGCTGTTCCGATTGTGTTGCTGTTGCTCGTGTTGACTGCGCTTCTATACAAAAGATACCAGAACCAAAAAAAAATGGATATGCCACCCCCTTTCAAACCTCCTCCACCACCAGTCAAATACACATCAGTGAGGAACCATGATGTCCACATGAATGATATTCTTGTATGAATGTGTCATGCACTTTAGTACTCACAATCCGTGGGCCACAAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_11368905_11374145.mRNA True 1134 mRNA 0.42 7 11368859 11374145

Neighbor

gene id symbol gene type direction distance location
CI01000304_11359135_11362408 NA coding downstream 6451 11358917 ~ 11362408 (-)
CI01000304_11338304_11348212 ILK coding downstream 20647 11338019 ~ 11348212 (-)
CI01000304_11330383_11335607 SMPD1 coding downstream 32739 11329642 ~ 11336120 (-)
CI01000304_11304660_11306789 NA coding downstream 61988 11304560 ~ 11306871 (-)
CI01000304_11282245_11288087 PROSER1 coding downstream 80772 11282141 ~ 11288087 (-)
CI01000304_11445002_11447156 NA coding upstream 69586 11443731 ~ 11447156 (-)
CI01000304_11479874_11503083 MTNR1B, MTNR1BB coding upstream 105525 11479670 ~ 11503494 (-)
CI01000304_11526057_11569114 NA coding upstream 151854 11525999 ~ 11569114 (-)
CI01000304_11575414_11578638 NA coding upstream 201183 11575328 ~ 11578638 (-)
CI01000304_11638983_11647850 TMEM135 coding upstream 264268 11638413 ~ 11649085 (-)
G425204 NA non-coding downstream 87655 11280976 ~ 11281204 (-)
G425230 NA non-coding downstream 98371 11269185 ~ 11270488 (-)
G425229 NA non-coding downstream 100410 11268197 ~ 11268449 (-)
G425228 NA non-coding downstream 101762 11266326 ~ 11267097 (-)
G425187 NA non-coding downstream 118648 11245182 ~ 11250211 (-)
G425269 NA non-coding upstream 55472 11429617 ~ 11430150 (-)
G425479 NA non-coding upstream 73482 11447627 ~ 11447954 (-)
G425517 NA non-coding upstream 205086 11579231 ~ 11579432 (-)
G425533 NA non-coding upstream 224744 11598889 ~ 11599266 (-)
G425559 NA non-coding upstream 298217 11672362 ~ 11672698 (-)
G424808 NA other downstream 826194 10444355 ~ 10542665 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other downstream 1175964 10190574 ~ 10192357 (-)
CI01000304_10160458_10161768 VAMP2 other downstream 1204529 10160458 ~ 10163762 (-)
CI01000304_09737662_09738777 NA other downstream 1629388 9736746 ~ 9738777 (-)
G425580 NA other upstream 494532 11868677 ~ 11872906 (-)
G426106 NA other upstream 962556 12336701 ~ 12340228 (-)
CI01000304_12559311_12559998 NA other upstream 1184709 12558854 ~ 12560135 (-)
G426147 NA other upstream 1321853 12719497 ~ 12805926 (-)
G427057 NA other upstream 2133496 13507641 ~ 13507922 (-)

Expression


Co-expression Network