CI01000304_11445002_11447156


Basic Information

Item Value
gene id CI01000304_11445002_11447156
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11443731 ~ 11447156 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_11445002_11447156.mRNA
TTTTCTCTGGTGTTAAAAGTCAGACAGACAAAGACAAGCAGAACAGCCAAACTAAACAGAGCTACACAGAGAGAGCCTTTAGCATTACGATGAAAAAAGCAGAAACGCAGCAGAGACGGGCAGAGCTGAATGACAGAAAGAACATTCAACATTATCACAGAATAATAGCAGAAATGTCTGATGGTATTTATGACAATGTGATCAGGACTGAGTCTGCGGGAATGAACAGAGAGAGAGTTGAGATGACGGTGGAAATCTATGAGAGTGCAGATTGTGTGAGAGATCATGACTTCAGGACAGAGACAAACACACACCAACCACTTCAGCGTACAGGAAGTGATCGTGTGAAGATCAGAAGCTCCAGAGCAGCTCCAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGACTGCAGTCATAGTGCTGTGTGTCTACATCCATACAAAGAGCACAAAAGAGAGAGATCTACTAACCAAGATTACCAGCCTCACAGAAGAGAGAGACCAGCTACTAAACAAGATTACCAACCTCACAGAAGAGAGAGATCAGCTACTAACCAAGAATACCAACCTCACAGAAGACAGAGATCAGCTACTAACCAAGACTACCAACCTCACAGAAGAGAGAGATCAGCTACAAATCACAATCAAAACTTTCAAAACAGAGAAAGATCAGATAGAGATCAAGAACCAAAAACTGACAAATAAAATAAAAGAGTTATCCAAGAATGATGATCTAATAAAACATCTTCATGAAAAGGATGTATGGATTTACTATCAATCTAGTTTTTACTACATTTCATCTGAGAAGAAGAGCTGGACTGAGAGCAGAAAATACTGTACAGAGAGAGGAGCAGATCTGATCATCATAAACAACAAAGAGGAACAAGATTTTGTTAAGAAAATGTCTGATGGTGTTAAAGTCTGGATTGGTCTGACTGACAGTGATGTGGAGGACACATGGAAATGGGTTGATGACACCTACTTGACCTCTAAGTTCTGGAAGTCTGGAGAGCCAAATGGACGTACACGAGAGAACTGTGTTCTTCTAACTGAATCATCAGGATGGACTTATTCATCAGGATGGGCTGATTATCCATGTCATGGTCATTATCAATGGATCTGTGAGAAAACCATTAAAACAAGTCATTAAATCACATACTTGTTTATGATGTAAATTACGAACAGACAAAAAGGTCTTTCTCTCTTTAAGACAATCTGAAAAAGTGAAAGTGAAAGTGACGAGACATGTAGCTAAGTATGGTGTCCAGTACTTGGAAGTTGTGCTCTGCATTTAAGCCATCCAAGTGCACACACACAGCAGTGAGCAAACACATACACACACCGTGAACACACACTCGGAGCAGTGGGCAGCCAATTTTTGCTGCAGCGCCCGGCGAGCAGTCGGGGGTTCGGTGCCTTGCTCAAGGGTCTCACCTTAGTCGTGGTATTGAGGGTAGAAGAGAGTTCTGTATATTCACTCCCCCCACGTCAATTCCTGCCAGTACTGAGACTCAAACTGCAATTATTATAATGCATTTTAACTTTGGTTACAATTATTTATTAAAAGATGTATTGCATTATAATATAATGCATTATACAGAAAGGCTTTAAGTAAAGTTTTACCATAAATTTTACTGAGGAAGACTCAAACCTGCAACCTTGGGTTACAAGTCCAACTCTCTAACCATTAGCCCACAACTACCCCACAAAATATATACACACATAGGTTCTCTTCCTCAGTAAAAATTATGGCAACACTTTACTGAAAGCGTTTATGTATAATGCATTATAAAAGTGTTCATAATGTGTTATAATGCATTATAACTTTTCATAATAGTAACTGCATTATAATAATTGCAGATTCCTTGTTCTGAAATTGTTTGGTTGTGATGTGTTTTAATCCATTATAGATTCCAAAGGTGTACCAAAAGTATTAAAATGTATTATAACTGTGGTTAAAAATTATTCATGAGATCATACAATGCATTATAAGGTGCTGTTTGAGTGTCTGTATCTGATGGTGTCCATCAATGTGTCTAATACAGAGGAAGTAGAATACTGTGATCATTTAACATTTAATCCTTTAGAAGATGTTTTTTTTTCTGGGAAGACCCTGTAAATTTGAGCAATTTTAGTCTATGGAACACAAACTAGCACAAGTAAGCATAAAAGAGCAAGTGTTGGAGTAGTTTACAGGTGTTTGTCTGCATCTGTGTTACTGATGAGAGTATAGAGACTCATTCCGAACTTCATGTCTGTTTGTCATCAGGAAGTGATTCTGAAAGATGGTGCTGCACTTTATACATCTTTCTTAATTCAGACACTTCCTCCTGTAGCTGCTTCAGTATCTTCATCCACTCTGCCTCTCTTTTAACATTTAACACTTGCTTTACCCAGTGCTGTCATTCATAATCTAATAAA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_11445002_11447156.mRNA True 2422 mRNA 0.39 6 11443731 11447156

Neighbor

gene id symbol gene type direction distance location
CI01000304_11368905_11374145 NA coding downstream 69586 11368859 ~ 11374145 (-)
CI01000304_11359135_11362408 NA coding downstream 81323 11358917 ~ 11362408 (-)
CI01000304_11338304_11348212 ILK coding downstream 95519 11338019 ~ 11348212 (-)
CI01000304_11330383_11335607 SMPD1 coding downstream 107611 11329642 ~ 11336120 (-)
CI01000304_11304660_11306789 NA coding downstream 136860 11304560 ~ 11306871 (-)
CI01000304_11479874_11503083 MTNR1B, MTNR1BB coding upstream 32514 11479670 ~ 11503494 (-)
CI01000304_11526057_11569114 NA coding upstream 78843 11525999 ~ 11569114 (-)
CI01000304_11575414_11578638 NA coding upstream 128172 11575328 ~ 11578638 (-)
CI01000304_11638983_11647850 TMEM135 coding upstream 191257 11638413 ~ 11649085 (-)
CI01000304_11654405_11655792 NA coding upstream 206779 11653935 ~ 11656016 (-)
G425269 NA non-coding downstream 13581 11429617 ~ 11430150 (-)
G425204 NA non-coding downstream 162527 11280976 ~ 11281204 (-)
G425230 NA non-coding downstream 173243 11269185 ~ 11270488 (-)
G425229 NA non-coding downstream 175282 11268197 ~ 11268449 (-)
G425228 NA non-coding downstream 176634 11266326 ~ 11267097 (-)
G425479 NA non-coding upstream 471 11447627 ~ 11447954 (-)
G425517 NA non-coding upstream 132075 11579231 ~ 11579432 (-)
G425533 NA non-coding upstream 151733 11598889 ~ 11599266 (-)
G425559 NA non-coding upstream 225206 11672362 ~ 11672698 (-)
G425549 NA non-coding upstream 249438 11696594 ~ 11698398 (-)
G424808 NA other downstream 901066 10444355 ~ 10542665 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other downstream 1250836 10190574 ~ 10192357 (-)
CI01000304_10160458_10161768 VAMP2 other downstream 1279401 10160458 ~ 10163762 (-)
CI01000304_09737662_09738777 NA other downstream 1704260 9736746 ~ 9738777 (-)
G425580 NA other upstream 421521 11868677 ~ 11872906 (-)
G426106 NA other upstream 889545 12336701 ~ 12340228 (-)
CI01000304_12559311_12559998 NA other upstream 1111698 12558854 ~ 12560135 (-)
G426147 NA other upstream 1248842 12719497 ~ 12805926 (-)
G427057 NA other upstream 2060485 13507641 ~ 13507922 (-)

Expression


Co-expression Network