Item | Value |
---|---|
gene id | CI01000304_11526057_11569114 |
gene name | NA |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000304 |
NCBI id | null |
chromosome length | 18613800 |
location | 11525999 ~ 11569114 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
description |
---|
Protocadherin Fat 3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000304_11526057_11569114.mRNA | True | 13309 | mRNA | 0.49 | 24 | 11525999 | 11569114 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000304_11479874_11503083 | MTNR1B, MTNR1BB | coding | downstream | 22505 | 11479670 ~ 11503494 (-) |
CI01000304_11445002_11447156 | NA | coding | downstream | 78843 | 11443731 ~ 11447156 (-) |
CI01000304_11368905_11374145 | NA | coding | downstream | 151854 | 11368859 ~ 11374145 (-) |
CI01000304_11359135_11362408 | NA | coding | downstream | 163591 | 11358917 ~ 11362408 (-) |
CI01000304_11338304_11348212 | ILK | coding | downstream | 177787 | 11338019 ~ 11348212 (-) |
CI01000304_11575414_11578638 | NA | coding | upstream | 6214 | 11575328 ~ 11578638 (-) |
CI01000304_11638983_11647850 | TMEM135 | coding | upstream | 69299 | 11638413 ~ 11649085 (-) |
CI01000304_11654405_11655792 | NA | coding | upstream | 84821 | 11653935 ~ 11656016 (-) |
CI01000304_11665326_11670757 | CCT8 | coding | upstream | 96145 | 11665259 ~ 11670960 (-) |
CI01000304_11706322_11747949 | GRIK1B, GRIK1, GRIK2, GRIK1A | coding | upstream | 137101 | 11706215 ~ 11747949 (-) |
G425479 | NA | non-coding | downstream | 78045 | 11447627 ~ 11447954 (-) |
G425269 | NA | non-coding | downstream | 95849 | 11429617 ~ 11430150 (-) |
G425204 | NA | non-coding | downstream | 244795 | 11280976 ~ 11281204 (-) |
G425230 | NA | non-coding | downstream | 255511 | 11269185 ~ 11270488 (-) |
G425229 | NA | non-coding | downstream | 257550 | 11268197 ~ 11268449 (-) |
G425517 | NA | non-coding | upstream | 10117 | 11579231 ~ 11579432 (-) |
G425533 | NA | non-coding | upstream | 29775 | 11598889 ~ 11599266 (-) |
G425559 | NA | non-coding | upstream | 103248 | 11672362 ~ 11672698 (-) |
G425549 | NA | non-coding | upstream | 127480 | 11696594 ~ 11698398 (-) |
G425550 | NA | non-coding | upstream | 132050 | 11701164 ~ 11703380 (-) |
G424808 | NA | other | downstream | 983334 | 10444355 ~ 10542665 (-) |
CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 1333104 | 10190574 ~ 10192357 (-) |
CI01000304_10160458_10161768 | VAMP2 | other | downstream | 1361669 | 10160458 ~ 10163762 (-) |
CI01000304_09737662_09738777 | NA | other | downstream | 1786528 | 9736746 ~ 9738777 (-) |
G425580 | NA | other | upstream | 299563 | 11868677 ~ 11872906 (-) |
G426106 | NA | other | upstream | 767587 | 12336701 ~ 12340228 (-) |
CI01000304_12559311_12559998 | NA | other | upstream | 989740 | 12558854 ~ 12560135 (-) |
G426147 | NA | other | upstream | 1126884 | 12719497 ~ 12805926 (-) |
G427057 | NA | other | upstream | 1938527 | 13507641 ~ 13507922 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_002785 | fat3b | coding | NC_007121.7 | CM002894.2 | 25108853 ~ 25204034 (-) |