CI01000304_11812792_11817948


Basic Information

Item Value
gene id CI01000304_11812792_11817948
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11812514 ~ 11818413 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_11812792_11817948.mRNA
CTATATAAATGTTGTCATGGAATCATGAGTAGAGTCAATAACAAAATAGTATAGAATATCACTTTAATAATAATGAACTGGTTTCTGTTTGCATTCACTGTGTCTTCAGACTGACATGCAGTAGAAAAGAAAAAAACTTGTTTTTTCCTGCCACAACGGCCACCAAATATTTTACACTTTTAACACAGTCCCCACCTAGTCACACTTCCCTCCAACACCCAACCACACACACACACACACACACACACACACAAAAACTTCTCAGGTATCAGATAATAATGACTCCCTCCCTCAAGTCCTCTCTCTCTGCTCTGACATCTTTTTTCTTTTTCTTTTGTTCGGTGCGTGTTCACCAGATTCATCAACATGGCCAGACTCATGTCTATATCCTGATGTTACAAACCCACACACAATTCATCGCCATCATCCTAATTCATCTAGATGCACCAGTCATTATCAGAGAGGAGAAATGTTTGGCTGAGGGGCTCACGATTTACACACTTCCAATGACACGCTTGAACAAAGAGTGCCAGTCTGGGGGAAAGAGAGAGGGAGCGGGAGAAATGGGGAGGGAAGCCCCAATGGAAAGGAAGGAAGCCATGAAAGCCACACCGGTATTACAGCCCTTCTTCAGCACACCTGAGACCAACGGACAGAAACTTCCACAGCTGATGAGAACAACCTACAAGCCCTGACAGGTCCAGAGAGAGGGGAAATGAGTGTGTTCATAAGGCCTCAAGCCATCTTTTAAGGCCTTAAGAGACTTCATTTGAGTAGGAGGGATAATCGTGAGTGCCGGGATTCCGTCATTCTCTCATTCTTTGACTCTTATTCTCTTGCTTCTTTTTTTGCACCTGCGTCAACAAGCAGAACCTCACAAACAAAGTGCTTCTTTAAGAAACTAAAGAGAAAAAGGGTAGGGAGTTGAAAGACTCAAGCCCTGAAAGGGCAGGAATGTCACACGCAAACAGCAGAGAGACAGACAAGCTACAAAAGCAAAGACCGACAGAAAGCTCTTGAGAAGAATAGCTTTCAGACTATTCATTCATTTCTTGCTTTTTTCATTTATAAAGGCTTCATGTCTCTTTAATTTTAAAGAGAAATCAAAAGTCAGAGGCTAATTAGTAATGCTGGATAAAGTCAAGAGATCTGAAAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_11812792_11817948.mRNA True 1160 mRNA 0.42 4 11812514 11818413

Neighbor

gene id symbol gene type direction distance location
CI01000304_11685224_11691071 NA coding upstream 121443 11685224 ~ 11691071 (+)
CI01000304_11676155_11681977 MAP3K7CL coding upstream 129383 11676155 ~ 11683131 (+)
CI01000304_11613446_11620345 RAB38 coding upstream 191951 11613446 ~ 11620563 (+)
CI01000304_11582257_11610398 GRM5, GRM5A coding upstream 201903 11581808 ~ 11610611 (+)
CI01000304_11570457_11574856 CHORDC1 coding upstream 237224 11570457 ~ 11575290 (+)
CI01000304_11866424_11868022 UGT5D1 coding downstream 47687 11866100 ~ 11868083 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding downstream 175073 11993486 ~ 12062218 (+)
CI01000304_12065676_12071391 TRIM47 coding downstream 246406 12064381 ~ 12071430 (+)
CI01000304_12213555_12231910 NA coding downstream 393641 12212054 ~ 12232732 (+)
CI01000304_12314575_12337592 SYNJ1 coding downstream 495903 12314316 ~ 12337690 (+)
G425385 NA non-coding upstream 67892 11737683 ~ 11744622 (+)
G425394 NA non-coding upstream 138310 11673994 ~ 11674204 (+)
G425393 NA non-coding upstream 150232 11662026 ~ 11662282 (+)
G425392 NA non-coding upstream 150515 11661766 ~ 11661999 (+)
G425370 NA non-coding upstream 163285 11648993 ~ 11649229 (+)
G425435 NA non-coding downstream 17899 11836312 ~ 11836603 (+)
G425441 NA non-coding downstream 23371 11841784 ~ 11842239 (+)
G425442 NA non-coding downstream 25512 11843925 ~ 11844141 (+)
G425443 NA non-coding downstream 25818 11844231 ~ 11844535 (+)
G425404 NA non-coding downstream 27130 11845543 ~ 11847015 (+)
CI01000304_10555326_10571933 NA other upstream 1256810 10555216 ~ 10572164 (+)
G424251 NA other upstream 1619619 10188822 ~ 10189404 (+)
G424246 NA other upstream 1685192 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2246941 9561005 ~ 9565778 (+)
G423614 NA other upstream 2863092 8949036 ~ 8949422 (+)
G425718 NA other downstream 610292 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1738038 13578049 ~ 13595097 (+)
G426312 NA other downstream 2511635 14330048 ~ 14330886 (+)
G426828 NA other downstream 3130477 14948890 ~ 14950592 (+)
G427860 NA other downstream 4067041 15885454 ~ 15889591 (+)

Expression


Co-expression Network