CI01000304_12362738_12374610


Basic Information

Item Value
gene id CI01000304_12362738_12374610
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12362738 ~ 12374610 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_12362738_12374610.mRNA
GTGAAGAATGGAAAAACACAGACAGGTTCAGTAAATGTTGACAGTCTGTGGGGGAAGCAGGTGGATTTCATGCAGAAGAACTGTAAATTCTGGCTGCTGGAAAATGAACACAAAATCCCTGACCTGAAAGAGCTCAGTGTGTGTGTGAACATAAAGAGGAAGCTCAGCACTTCGCACTGGACCGCGTTCACATACCTGCACCCTGATAAGACACACATAGAGCTAGGGATGAAGGGTCTTGGAAAAGACCTCATTATCATAATGTTTGGGAGAGTCTGGACCATTTCTTCTGTGGTGTCCTTGGAAAGCTGGCATTCAGTTTGCATGACGTGGTCCAAGTCTATGACTGAGCCAAAAGTCTATGTTAATGGATCCAAGGTGGTCTTAAAAGCACAGTTTAAAGGAATGGCTCTGCACTCTCATACTGTGGCCGGTGGTGGCACTTTGACTTTAGCTGTGGCCCACAATTTTGTAAAGGACGAGATTAACATTGAAACAGGAACTGAACTAAAGGGCAGTTTAAGTCAGTTCAGGATATGGAAACATGTACGTAGCGCTGAGGACATTTCAAGGAAGACCTGCACTGATGGGGATGTTCTGCACTGGGAGAAAAGAATCTGGAAAGAAGTCACAGACTGTCGGCATATACAAGACAATACGCAACAGTGTGACTGGCCTTATTATGAAGTAAAATTAGTGTTTACCATCAATCGTGAAGACGGAAACACAATAAATATTTATGACGCTAAAGAAGTTGTACATCAGTGGTTGACAAAAGCAATAGGAGAGTTAAAATTCGTGCAGCCATACATATATTTCCACGAAGTGTTTCCTTTAGGAGGGTTTGACTGCTTAGCTCAACTGACTGTGGTTCCTAGTGCTGATGTAGGGAAAATGCAGGAAGAACTCTCTGAGATCCTCGCCAAGAAAAACAAAATAGACCACTACGAAATCAATACAGATCCTGATTCCATCTTCATATACCCTCTTGTCACTATCACCACTCCATTCATGGAAACAACCCTGGCAGAAAGTTCCTCGACAATTAAACACACAACAGTTTTATCCTCAACAACATGTCTTACATTAAATACAACTACATGCTGTTCTACAGTTTCACCTGGAGGAATAATATCAGATAGTTATTTCAATGTCAACGTCAATGTGACTATAAAAGGCTCTGGTGACCCTAAGAATATAATTGAAACCTGGCTTAATAAAACTCTTTCTAGTGAAGGAATATCTGTGTTGCACTTCAAACTCGTGACCTCCTCAACACATGCACGAAAACGAAGTGTGGAAACAAAATCATCCCAAGTGGATAGAAAGCATTCCATGCTCTCAGTAACAAGCCATAGCTGTGTCTTTCATGCTCGGGTAACAACTTCCTCAAACATCGCAGAGACACAAGAACAAATTCATTTTCTTCTGGAGAAAACATACACTGATGGATCAGTATGCTTGGTTGCCCAATCTGACGACATTTTAATTTCTTATATTGAGCCATGTCCTGAACACAACCATCACACCAGACAGGGGCTTTTCAAATGGCCCCAAACTGAGGTTCAGCGCATCACCTCGCTTTCCTGTGAAGGAAACCCTGAAAAGACAGCATATAGGGAATGTTTTCTGGATGAAAACTTTAGCAATGCGCTTTGGAAGTCTCCAGACCTGGGCTATTGCCAGGTTGTGGTCAACAGTGTGTCAGATCTGGAGGGCATTCCAGTCACTAATGATAATGCAGAAGATATTCTGATGATGATTGTGGACTTGATACATAAGAACAAAGATCTGGATGAGTACGAGCTCTCAATGGTACTGAATAAACTAGCCGATGTGATTAACGTTAGCGTGATCACACCTCCGCTGGGAGAGGTCATCATCAGCATCACGTCTGACATCCTGGAGTCTACAAGCAACCTGCTGCCTTTCACCAACAGTATTCTGAACATCACAGAGGCTGTTGGAGACCAGATGTTAGGGTTCACCGGAGACTTAGTCAGTTTAACAGCTTCTGCCATGGCAATATCAGTGGTCAATATTGACCAAGAAAATTTTCATAACCTCACCTTTGGAGTCTCATCCACTAACAAAGGCTTTAACCCTGAGATTTATATCAACCAGGAGCCTTTTGATGGTACAGTGGCCTTCGTTTCTCTTCCCACTGAAATACAAGACAGATTCCCAATCGTAAACAACACCAGCCCCCGTATTCAGTTTCAGTTTTATGGTGTTCCAGCTCTCTTTCAAACAAAGAATAAACCAGATGGGAAAAAACTGAACACTTACGTGGTGTCTGCAAGTGTGACTAATGCCACAGGAACCATTGAAAACCTAAAAGAATATGTTGCAGTCACTCTGCACCATCTAACAGCTAAGAGAGTGCTGTGTCTTTTAAGTGTTTATGCATTTACTGTTTTAGATGGATATGGAGGATGGAGTCCAAAGGGGTGCTGGACGTATAATATCAGCAAAGACTACACAACCTGTCTGTGTGACCACATGACCCACTTTGGAGTGCTGCTGTTAAGAAGAGACTACCCGTCCAAAATTCTGTTGAACCTGTCCATTGCATTACTGGGACTGAACCTGGTGTTCCTACTGAACTCCTGGATTTCTTCTTTTGACATCTATGGCCTATGCATTGCTGTGGCGGTGACCTTACACTATTTTTTACTGACTTCCTTTACCTGGATGGGCTTGGGGGCCGTGAATATGTACTTTGCTTTGGTCAAAGTTTTCAATGTGTATGTGCCCTCCTACATCTTGAAATTCTGCCTGCTTGGCTGGGGGATTCCACTTGTTATATGCGGCTTGGTGCTGGCTATAAACAGGGATGCGTATGGCATGAACACCATGAGTGATTCCCAAATGACACTGGATGATTCTGAAATGTTCTGCTGGGTGCAAAATGATGTGGTATTCTACGTGACAGTGGTGAGCTACATAGCCTTCATACTACTGTGCAATGGCTCCATCTTCTTAGTGGTTCTGATCCAGATCCGAAACATGCAATTCAATCAACCTGCTGGCACCCGAAGTGGGATCTTGAAAGACCTGCGGGCTGTGGCGAGCCTTACCTTCTTACTGGGTCTCACCTGGTTTGTGGCTTTTCTCGCTTGGGGTCCTGTCAAAGTGTTCCTTCTCTACCTGTTCTCCATACTTAACAGCCTTCAAGGATTCTTCATTTTTGTGTTCCACTGTCTCATGAAGGAAAACGTACGTAAGCAATGGAGAATACATTTATGTTGTGGAGCTTTCAAGCTGCAGGAATACTCTGAATGGAGCCAAACTGCAACTGTGGTTCCCAAACACAAACCCAATCCACCAAATACATTTCCCTTCATGGCATCTGTGAGATCCATCAAGTCTAATTCAACTCAGAGCTCAACTGTTTCCTCAGAATCCAGCCAACGTCAAGTGACTATCACAAGACCGGACCTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_12362738_12374610.mRNA True 3445 mRNA 0.43 23 12362738 12374610

Neighbor

gene id symbol gene type direction distance location
CI01000304_12353305_12359214 FHL1B coding upstream 2900 12353006 ~ 12359838 (+)
CI01000304_12340979_12347664 SLC9A6B coding upstream 14848 12339847 ~ 12347890 (+)
CI01000304_12314575_12337592 SYNJ1 coding upstream 25048 12314316 ~ 12337690 (+)
CI01000304_12213555_12231910 NA coding upstream 130006 12212054 ~ 12232732 (+)
CI01000304_12065676_12071391 TRIM47 coding upstream 291308 12064381 ~ 12071430 (+)
CI01000304_12375591_12385064 HTATSF1 coding downstream 981 12375591 ~ 12385120 (+)
CI01000304_12385473_12389970 NA coding downstream 10863 12385473 ~ 12390527 (+)
CI01000304_12394477_12400175 TMTOPS3B coding downstream 18890 12393500 ~ 12400315 (+)
CI01000304_12424217_12429262 NA coding downstream 48596 12423206 ~ 12430351 (+)
CI01000304_12437868_12439019 NA coding downstream 63048 12434972 ~ 12439086 (+)
G425764 NA non-coding upstream 60012 12302340 ~ 12302726 (+)
G425765 NA non-coding upstream 62116 12300413 ~ 12300622 (+)
G425666 NA non-coding upstream 105544 12255099 ~ 12257194 (+)
G425660 NA non-coding upstream 188679 12172882 ~ 12174059 (+)
G425635 NA non-coding upstream 246372 12111311 ~ 12116366 (+)
G425777 NA non-coding downstream 80571 12455181 ~ 12455395 (+)
G425778 NA non-coding downstream 80883 12455493 ~ 12455853 (+)
G425796 NA non-coding downstream 186464 12561074 ~ 12561425 (+)
CI01000304_12583384_12588591 WDR74 non-coding downstream 214311 12583384 ~ 12589788 (+)
G425812 NA non-coding downstream 216646 12591256 ~ 12593865 (+)
CI01000304_10555326_10571933 NA other upstream 1807034 10555216 ~ 10572164 (+)
G424251 NA other upstream 2169843 10188822 ~ 10189404 (+)
G424246 NA other upstream 2235416 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2797165 9561005 ~ 9565778 (+)
G423614 NA other upstream 3413316 8949036 ~ 8949422 (+)
G425718 NA other downstream 54095 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1181841 13578049 ~ 13595097 (+)
G426312 NA other downstream 1955438 14330048 ~ 14330886 (+)
G426828 NA other downstream 2574280 14948890 ~ 14950592 (+)
G427860 NA other downstream 3510844 15885454 ~ 15889591 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location