Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000304_12437868_12439019 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 12434972 ~ 12439086 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488854 | False | 3339 | TUCP | 0.39 | 4 | 12434972 | 12439086 |
| CI01000304_12437868_12439019.mRNA | False | 586 | mRNA | 0.44 | 4 | 12437658 | 12439019 |
| TU488852 | True | 507 | TUCP | 0.42 | 4 | 12437804 | 12439086 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_12424217_12429262 | NA | coding | upstream | 8250 | 12423206 ~ 12430351 (+) |
| CI01000304_12394477_12400175 | TMTOPS3B | coding | upstream | 37343 | 12393500 ~ 12400315 (+) |
| CI01000304_12385473_12389970 | NA | coding | upstream | 47131 | 12385473 ~ 12390527 (+) |
| CI01000304_12375591_12385064 | HTATSF1 | coding | upstream | 52538 | 12375591 ~ 12385120 (+) |
| CI01000304_12362738_12374610 | NA | coding | upstream | 63048 | 12362738 ~ 12374610 (+) |
| CI01000304_12468041_12473615 | ARR3A | coding | downstream | 29022 | 12468041 ~ 12473708 (+) |
| CI01000304_12478136_12484791 | NA | coding | downstream | 39117 | 12478136 ~ 12484978 (+) |
| CI01000304_12485748_12487703 | SSSCA1 | coding | downstream | 46729 | 12485748 ~ 12487763 (+) |
| CI01000304_12489630_12490940 | FAM89B | coding | downstream | 50563 | 12489582 ~ 12491500 (+) |
| CI01000304_12496984_12537562 | EHBP1L1B, FRMD8 | coding | downstream | 57860 | 12496879 ~ 12539153 (+) |
| G425764 | NA | non-coding | upstream | 134932 | 12302340 ~ 12302726 (+) |
| G425765 | NA | non-coding | upstream | 137036 | 12300413 ~ 12300622 (+) |
| G425666 | NA | non-coding | upstream | 180464 | 12255099 ~ 12257194 (+) |
| G425660 | NA | non-coding | upstream | 263599 | 12172882 ~ 12174059 (+) |
| G425635 | NA | non-coding | upstream | 321292 | 12111311 ~ 12116366 (+) |
| G425777 | NA | non-coding | downstream | 16162 | 12455181 ~ 12455395 (+) |
| G425778 | NA | non-coding | downstream | 16474 | 12455493 ~ 12455853 (+) |
| G425796 | NA | non-coding | downstream | 122055 | 12561074 ~ 12561425 (+) |
| CI01000304_12583384_12588591 | WDR74 | non-coding | downstream | 149902 | 12583384 ~ 12589788 (+) |
| G425812 | NA | non-coding | downstream | 152237 | 12591256 ~ 12593865 (+) |
| CI01000304_10555326_10571933 | NA | other | upstream | 1881954 | 10555216 ~ 10572164 (+) |
| G424251 | NA | other | upstream | 2244763 | 10188822 ~ 10189404 (+) |
| G424246 | NA | other | upstream | 2310336 | 10116343 ~ 10127322 (+) |
| CI01000304_09564068_09565679 | HRH2B | other | upstream | 2872085 | 9561005 ~ 9565778 (+) |
| G423614 | NA | other | upstream | 3488236 | 8949036 ~ 8949422 (+) |
| CI01000304_13578347_13595075 | NA | other | downstream | 1117432 | 13578049 ~ 13595097 (+) |
| G426312 | NA | other | downstream | 1891029 | 14330048 ~ 14330886 (+) |
| G426828 | NA | other | downstream | 2509871 | 14948890 ~ 14950592 (+) |
| G427860 | NA | other | downstream | 3446435 | 15885454 ~ 15889591 (+) |
| G428017 | NA | other | downstream | 3644211 | 16083230 ~ 16083714 (+) |
