Item | Value |
---|---|
gene id | CI01000304_12496984_12537562 |
gene name | EHBP1L1B, FRMD8 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000304 |
NCBI id | null |
chromosome length | 18613800 |
location | 12496879 ~ 12539153 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
frmd8 | Acts upstream of or within anterior/posterior pattern specification; negative regulation of Wnt signaling pathway; and regulation of canonical Wnt signaling pathway. Predicted to be located in cytoskeleton; cytosol; and membrane. Predicted to be active in plasma membrane. Is expressed in otic vesicle and post-vent region. Orthologous to several human genes including FRMD8 (FERM domain containing 8). |
ehbp1l1b | Predicted to be involved in actin cytoskeleton organization. Predicted to be part of filamentous actin. Predicted to be active in microtubule organizing center. Orthologous to human EHBP1L1 (EH domain binding protein 1 like 1). |
id | name | namespace |
---|---|---|
GO:0005856 | cytoskeleton | cellular_component |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000304_12496984_12537562.mRNA | True | 11665 | mRNA | 0.45 | 45 | 12496879 | 12539153 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000304_12489630_12490940 | FAM89B | coding | upstream | 5379 | 12489582 ~ 12491500 (+) |
CI01000304_12485748_12487703 | SSSCA1 | coding | upstream | 9116 | 12485748 ~ 12487763 (+) |
CI01000304_12478136_12484791 | NA | coding | upstream | 11901 | 12478136 ~ 12484978 (+) |
CI01000304_12468041_12473615 | ARR3A | coding | upstream | 23171 | 12468041 ~ 12473708 (+) |
CI01000304_12437868_12439019 | NA | coding | upstream | 57860 | 12434972 ~ 12439086 (+) |
CI01000304_12539537_12551905 | VPS51 | coding | downstream | 176 | 12539329 ~ 12552251 (+) |
CI01000304_12556446_12557806 | FAUB, UBIM, FAU | coding | downstream | 17293 | 12556446 ~ 12558076 (+) |
CI01000304_12569155_12569469 | NA | coding | downstream | 30002 | 12569155 ~ 12569734 (+) |
CI01000304_12583384_12588591 | WDR74 | coding | downstream | 44231 | 12583384 ~ 12589788 (+) |
CI01000304_12601154_12621980 | EHD1B, EHD1 | coding | downstream | 61683 | 12600836 ~ 12621993 (+) |
G425778 | NA | non-coding | upstream | 41026 | 12455493 ~ 12455853 (+) |
G425777 | NA | non-coding | upstream | 41484 | 12455181 ~ 12455395 (+) |
G425764 | NA | non-coding | upstream | 194153 | 12302340 ~ 12302726 (+) |
G425765 | NA | non-coding | upstream | 196257 | 12300413 ~ 12300622 (+) |
G425666 | NA | non-coding | upstream | 239685 | 12255099 ~ 12257194 (+) |
G425796 | NA | non-coding | downstream | 21921 | 12561074 ~ 12561425 (+) |
G425812 | NA | non-coding | downstream | 52103 | 12591256 ~ 12593865 (+) |
G425830 | NA | non-coding | downstream | 145504 | 12684657 ~ 12684926 (+) |
G425816 | NA | non-coding | downstream | 146975 | 12686128 ~ 12688600 (+) |
G425718 | NA | other | upstream | 57793 | 12436554 ~ 12436605 (+) |
CI01000304_10555326_10571933 | NA | other | upstream | 1941175 | 10555216 ~ 10572164 (+) |
G424251 | NA | other | upstream | 2303984 | 10188822 ~ 10189404 (+) |
G424246 | NA | other | upstream | 2369557 | 10116343 ~ 10127322 (+) |
CI01000304_09564068_09565679 | HRH2B | other | upstream | 2931306 | 9561005 ~ 9565778 (+) |
CI01000304_13578347_13595075 | NA | other | downstream | 1017298 | 13578049 ~ 13595097 (+) |
G426312 | NA | other | downstream | 1790895 | 14330048 ~ 14330886 (+) |
G426828 | NA | other | downstream | 2409737 | 14948890 ~ 14950592 (+) |
G427860 | NA | other | downstream | 3346301 | 15885454 ~ 15889591 (+) |
G428017 | NA | other | downstream | 3544077 | 16083230 ~ 16083714 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|