CI01000304_12569155_12569469


Basic Information

Item Value
gene id CI01000304_12569155_12569469
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12569155 ~ 12569734 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_12569155_12569469.mRNA
ATGGGCGAACGTTACCGACACCAGTGTCTCCATCATCTGCATCACGGCCTGCTGTGTTCGGCTGTCTCACGCACATCAGCCCACTCAACGCAAATGAGTCTTCCTCTGTTGTTTGCTACAGTTCATCTGTTGGCATTCCAAAAGTGCTTTTATAATTTGTCACAGTCTATCGAGTATTTGAACTCCGGCAGAGGTTGGGGTCAGATCTCTCTTCCCTCCGGTACGGCCCGTCCTGCACGCCCGTCTCAATTAAGAGTCTTGATGGAGCCCATGATGGATGAATCCAAATCATCGGGTGTCAGTCTTCAGATGTGATGCTGCTCAAACAGTTTCTCCGGCTTGTGATATTTATCTCATTGGTTGATTTGCTTTGAAATGTTTGTGTAAACTTCACCATCTGATTTTTCGTAAAAAATACTTCTTGTGCGGTTTAAGGACACTAATAGAACTACCCTGACCGAACTGCAACAACTGAGCCATATATTCGTAATTTGATCAATTATTATATTGTACCTCTACATACAGGGTACATTTATATGTATCTACCACAAATACTGAAATAGCAAATACTTAGCAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_12569155_12569469.mRNA True 580 mRNA 0.43 1 12569155 12569734

Neighbor

gene id symbol gene type direction distance location
CI01000304_12556446_12557806 FAUB, UBIM, FAU coding upstream 11079 12556446 ~ 12558076 (+)
CI01000304_12539537_12551905 VPS51 coding upstream 16904 12539329 ~ 12552251 (+)
CI01000304_12496984_12537562 EHBP1L1B, FRMD8 coding upstream 30002 12496879 ~ 12539153 (+)
CI01000304_12489630_12490940 FAM89B coding upstream 77655 12489582 ~ 12491500 (+)
CI01000304_12485748_12487703 SSSCA1 coding upstream 81392 12485748 ~ 12487763 (+)
CI01000304_12583384_12588591 WDR74 coding downstream 13650 12583384 ~ 12589788 (+)
CI01000304_12601154_12621980 EHD1B, EHD1 coding downstream 31102 12600836 ~ 12621993 (+)
CI01000304_12653236_12670625 CXADR coding downstream 83103 12652837 ~ 12670983 (+)
CI01000304_12718988_12729338 NA coding downstream 149033 12718767 ~ 12729850 (+)
CI01000304_12744525_12773999 NA coding downstream 174325 12744059 ~ 12774312 (+)
G425796 NA non-coding upstream 7730 12561074 ~ 12561425 (+)
G425778 NA non-coding upstream 113302 12455493 ~ 12455853 (+)
G425777 NA non-coding upstream 113760 12455181 ~ 12455395 (+)
G425764 NA non-coding upstream 266429 12302340 ~ 12302726 (+)
G425765 NA non-coding upstream 268533 12300413 ~ 12300622 (+)
G425812 NA non-coding downstream 21522 12591256 ~ 12593865 (+)
G425830 NA non-coding downstream 114923 12684657 ~ 12684926 (+)
G425816 NA non-coding downstream 116394 12686128 ~ 12688600 (+)
G425817 NA non-coding downstream 119115 12688849 ~ 12689076 (+)
G425718 NA other upstream 130069 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2013451 10555216 ~ 10572164 (+)
G424251 NA other upstream 2376260 10188822 ~ 10189404 (+)
G424246 NA other upstream 2441833 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3003582 9561005 ~ 9565778 (+)
CI01000304_13578347_13595075 NA other downstream 986717 13578049 ~ 13595097 (+)
G426312 NA other downstream 1760314 14330048 ~ 14330886 (+)
G426828 NA other downstream 2379156 14948890 ~ 14950592 (+)
G427860 NA other downstream 3315720 15885454 ~ 15889591 (+)
G428017 NA other downstream 3513496 16083230 ~ 16083714 (+)

Expression


Co-expression Network