CI01000304_12953008_12953457


Basic Information

Item Value
gene id CI01000304_12953008_12953457
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12952704 ~ 12953480 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_12953008_12953457.mRNA
ATGTTGCTTTTAATGGGTCAAAAATGTTTAATTCAAAAATTTTATACTCATATCTCATATTTTTCTGGCAGAAGGACGTGACCCTGAAGCCCCATGAGCGGAGGCAGAACCAGGCAGGACCGCTGCGCAAGAAGAAGCCCGGCCGAGTGCCGAACGGACTGAGCTTGGACCTACACAAGGACCGACTCAACCACAACAACCACCAGCACCACCACTCAGACCAGGAGAACAACCCTCGGCTGGCCCATACACACAGCAAGAAGAAGAAACACCTGCAGAAGAAACACCGACCTGTGAGTCTAACTTTATCTCACTATGTGTCCAGAAATCATGAATGTTATCTTTTCAAACAGGAACTGGGAGCATTGATGTATTTGATCAATTTTGTTGCTAGGCCTTTAGTTTATAGGCTTGAAAGGATTGATCTATTGATTTCCCACAAGTGCATGAGCTTCAGCATTTGGTTGGAGTAAAATTGGTGTCAGACGGAGTTGCATAATGGTTTTATCATGATAAGAAACCAGTCTAGTTGATGTCATTGTTACCCATTATTCTGGTGCAGTGTTTACATACTATTATAGTTTTTAAGTAATATTTTGAATTGACTTTTATTTTTATATTTTCAGTTTTCATTTTAATAGTCATCTAATAGTCAAAGATAATAACCCTCTTCTGGATGAGCTTCTGTCTGTGTTCCTTTTGCACCTAATTACAGTTTAGCTCAATAAGGCACTGCTTTGTTTCGGTGTTTTTTATGAATATCTTTACATAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_12953008_12953457.mRNA False 777 mRNA 0.39 1 12952704 12953480

Neighbor

gene id symbol gene type direction distance location
CI01000304_12887576_12889393 NA coding downstream 63311 12887224 ~ 12889393 (-)
CI01000304_12687020_12696284 AUTS2, AUTS2A coding downstream 256420 12686457 ~ 12696284 (-)
CI01000304_12570121_12574061 CNIH2 coding downstream 378643 12570059 ~ 12574061 (-)
CI01000304_12559311_12559998 NA coding downstream 392706 12558854 ~ 12560135 (-)
CI01000304_12558231_12558565 NA coding downstream 394114 12558086 ~ 12558741 (-)
CI01000304_13036242_13039203 NA coding upstream 81205 13034685 ~ 13039315 (-)
CI01000304_13068737_13075920 NA coding upstream 115022 13068502 ~ 13075920 (-)
CI01000304_13185020_13207799 INTS2 coding upstream 230738 13184218 ~ 13207799 (-)
CI01000304_13210441_13259571 MED13, MED13A coding upstream 256248 13209728 ~ 13262698 (-)
CI01000304_13276793_13278145 NA coding upstream 322767 13276247 ~ 13278145 (-)
G426147 NA non-coding downstream 231578 12719497 ~ 12805926 (-)
G426135 NA non-coding downstream 327326 12621467 ~ 12625378 (-)
G426188 NA non-coding downstream 362592 12589913 ~ 12590112 (-)
G426184 NA non-coding downstream 363484 12588923 ~ 12589220 (-)
G427020 NA non-coding upstream 141943 13095423 ~ 13095773 (-)
G427023 NA non-coding upstream 147965 13101445 ~ 13101719 (-)
G427025 NA non-coding upstream 151098 13104578 ~ 13104792 (-)
G427042 NA non-coding upstream 187353 13140833 ~ 13141045 (-)
CI01000304_13367200_13384209 NA non-coding upstream 338775 13365346 ~ 13395129 (-)
G426106 NA other downstream 612476 12336701 ~ 12340228 (-)
G425580 NA other downstream 1079798 11868677 ~ 11872906 (-)
CI01000304_11338304_11348212 ILK other downstream 1595558 11338019 ~ 11348212 (-)
G424808 NA other downstream 2410039 10444355 ~ 10542665 (-)
G427057 NA other upstream 554161 13507641 ~ 13507922 (-)
G427154 NA other upstream 978311 13931791 ~ 13950548 (-)
G427309 NA other upstream 1235988 14181932 ~ 14237078 (-)
CI01000304_14265881_14269102 NA other upstream 1314943 14265476 ~ 14269571 (-)
CI01000304_14286960_14294449 NA other upstream 1330191 14286960 ~ 14294449 (-)

Expression


Co-expression Network