CI01000304_13276793_13278145


Basic Information

Item Value
gene id CI01000304_13276793_13278145
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13276247 ~ 13278145 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_13276793_13278145.mRNA
GCTGATTTGACGGGGATAAAATGGAAGAGGTACGTGTGGCAAGGTCCGACCTCGGCGCCCATTCTATTCCCGGTCACCGAGGAGGACCCCATCCTCTGCAGCTTCAGCCGCTGTCTGAAAGCAGATGTGCTGAGCGTGTGGAGGCGGAGCCAGAGGCAGGGACGCAGAGAGCTCTGGCTCTTCTGGTGGGGCGACGATCCCAACTTCTCTGAACTCATCCACCACGAACTGACAGTGCGAAACAGAAGGAATGAAAAATGGGATGATATAGAGAAATAGGAAGAGGCAATTTATTTATTTATTTTTATCCTTTGTCCATTGACCCTCCTTCATTACCGTTCATTGTGCTGGAGGAGGGACAGAAATGGAGCCTTATGGGCAAAAGAGTGACCAATTCACCCATTCCATAATATCCCTCTCCACAAGAGATATTGCTGTATTTTCCTTTCGGTTGTGGAGATATTTGCTATAATAGCTGCATCCCTGTTGTGTCTCTTGACTTTCAGAGGAGAAGTCAGACATGTGCTTCCCTCTTTCTCTTGACACCTTCTTGTTTCTTTCTTCACTTGTTGGTCTCTGGAACAAGATTCCCACTGGCAAAGAAAACCCTGGAAAATTAGAAAAAAATTCTAATTTTGATTTCCAAGCCTGGAAAAGTGATTTTAAGGGTGAATATAATTTTTTTTTCTAGCCGTGACTTGCTCTAAAATATTTATTTGGTTAGAGATTTCACATCTAGAATAGCTAGAAAAGTTGTGGAAGACTTTTAATTGGTCATAAGGTGTTGGGAATTCTGTTAGAGTGTTAATTTCATTGCAGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_13276793_13278145.mRNA True 825 mRNA 0.43 2 13276247 13278145

Neighbor

gene id symbol gene type direction distance location
CI01000304_13210441_13259571 MED13, MED13A coding downstream 13549 13209728 ~ 13262698 (-)
CI01000304_13185020_13207799 INTS2 coding downstream 68448 13184218 ~ 13207799 (-)
CI01000304_13068737_13075920 NA coding downstream 200327 13068502 ~ 13075920 (-)
CI01000304_13036242_13039203 NA coding downstream 237044 13034685 ~ 13039315 (-)
CI01000304_12953008_12953457 NA coding downstream 322767 12952704 ~ 12953480 (-)
CI01000304_13342458_13361412 RPS6KB1A coding upstream 64275 13342420 ~ 13361412 (-)
CI01000304_13367200_13384209 NA coding upstream 88402 13365346 ~ 13395129 (-)
CI01000304_13406343_13432947 NA coding upstream 127148 13403026 ~ 13433611 (-)
CI01000304_13444023_13466208 CLTCB, CLTCA, CLTC coding upstream 165878 13444023 ~ 13466208 (-)
CI01000304_13479162_13481853 BTG3 coding upstream 200596 13478741 ~ 13482294 (-)
G427042 NA non-coding downstream 135202 13140833 ~ 13141045 (-)
G427025 NA non-coding downstream 171455 13104578 ~ 13104792 (-)
G427023 NA non-coding downstream 174528 13101445 ~ 13101719 (-)
G427020 NA non-coding downstream 180474 13095423 ~ 13095773 (-)
G426147 NA non-coding downstream 555121 12719497 ~ 12805926 (-)
G426990 NA non-coding upstream 55192 13333337 ~ 13364683 (-)
G427009 NA non-coding upstream 94941 13373086 ~ 13373659 (-)
G426995 NA non-coding upstream 101021 13379166 ~ 13379942 (-)
G426991 NA non-coding upstream 120235 13398380 ~ 13399670 (-)
CI01000304_12559311_12559998 NA other downstream 716112 12558854 ~ 12560135 (-)
G426106 NA other downstream 936019 12336701 ~ 12340228 (-)
G425580 NA other downstream 1403341 11868677 ~ 11872906 (-)
CI01000304_11338304_11348212 ILK other downstream 1919101 11338019 ~ 11348212 (-)
G427057 NA other upstream 229496 13507641 ~ 13507922 (-)
G427154 NA other upstream 653646 13931791 ~ 13950548 (-)
G427309 NA other upstream 911323 14181932 ~ 14237078 (-)
CI01000304_14265881_14269102 NA other upstream 990278 14265476 ~ 14269571 (-)
CI01000304_14286960_14294449 NA other upstream 1005526 14286960 ~ 14294449 (-)

Expression


Co-expression Network