CI01000304_13532811_13534129


Basic Information

Item Value
gene id CI01000304_13532811_13534129
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13532811 ~ 13534129 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490264
GGAGCGACTGTCCATCTGCCCTGCCACTCTCCACCTGATGACAGTGTACAAGTTACTGGAAAGTGGACAAAAAATAGTGCAACTAACAAAACTATCTGTGAATGGAATTTTAATAAAATTACTGGATCTTCCTCCGGTGATTGCATTCCTCACTTTACATTCAACAGAACGTCTTTTACACTAAGTATAGAAAATGTTCAGCCCAGTGACTCTGGTAATTACAGCTGTAAAACAACAAGATTAATTCTACCACCGACATTGGACAACATCTCAAATGTGATACTCCAAGTTGAAGGTCTGTCCCTGCAGCTCCTGAACAGCAGTAATGACACCTGTATTCATCTGCTCTGCTCTCTGGAGAGTCTGAACCCTGAGCTGGTGGACTTCACCTGGAGCCGAGAAGGTCAAAGGTCACTTCATCCATCCACATCTTATGACATGAAGAGTGAGCTGCATCTGTGTAAACCTGACTGGAGTGATG
>CI01000304_13532811_13534129.mRNA
ATGGTCTCTTTACTGGCTCTTTACTACCTGATTCTTACTGTCTTCAGCTTCACGATGTGTGGACGTGAGGGTGTTTTGGTTTTCAGAGCAGTTGAAGGAGCGACTGTCCATCTGCCCTGCCACTCTCCACCTGATGACAGTGTACAAGTTACTGGAAAGTGGACAAAAAATAGTGCAACTAACAAAACTATCTGTGAATGGAATTTTAATAAAATTACTGGATCTTCCTCCGGTGATTGCATTCCTCACTTTACATTCAACAGAACGTCTTTTACACTAAGTATAGAAAATGTTCAGCCCAGTGACTCTGGTAATTACAGCTGTAAAACAACAAGATTAATTCTACCACCGACATTGGACAACATCTCAAATGTGATACTCCAAGTTGAAGGTCTGTCCCTGCAGCTCCTGAACAGCAGTAATGACACCTGTATTCATCTGCTTTGCTCTCTGAAGAGTCTGAACCCTGAGCTGGTGGACTTCACCTGGAGCCGAGAGGGTCAAAGTTTACTTCATCCATCCACATCTTATGACATGAACAGTGAGCTGCATCTGTGTAAACCTGACTGGAGTGATGGAGACACAATCACCTGCCACGCCAGCTACTCAAGCGCCCAAACACCCCTCAGCTGGAACATTACACTTGACTTCAGCGATGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490264 True 295 lncRNA 0.44 1 13533250 13533544
CI01000304_13532811_13534129.mRNA False 661 mRNA 0.45 3 13532811 13534129

Neighbor

gene id symbol gene type direction distance location
CI01000304_13529418_13530787 NA coding downstream 2024 13529130 ~ 13530787 (-)
CI01000304_13517595_13527868 NA coding downstream 4943 13517176 ~ 13527868 (-)
CI01000304_13479162_13481853 BTG3 coding downstream 50517 13478741 ~ 13482294 (-)
CI01000304_13444023_13466208 CLTCB, CLTCA, CLTC coding downstream 66603 13444023 ~ 13466208 (-)
CI01000304_13406343_13432947 NA coding downstream 99200 13403026 ~ 13433611 (-)
CI01000304_13541959_13564807 NA coding upstream 7096 13541225 ~ 13564807 (-)
CI01000304_13692322_13711234 ALCAMA coding upstream 157829 13691958 ~ 13711234 (-)
CI01000304_13741930_13742220 NA coding upstream 207565 13741694 ~ 13742868 (-)
CI01000304_13903994_13909017 NA coding upstream 369587 13903716 ~ 13909017 (-)
CI01000304_13914502_13920992 ZPLD1 coding upstream 379858 13913987 ~ 13920992 (-)
G427000 NA non-coding downstream 18985 13510079 ~ 13513826 (-)
G427055 NA non-coding downstream 26739 13505845 ~ 13506072 (-)
G427052 NA non-coding downstream 30396 13502150 ~ 13502415 (-)
G427050 NA non-coding downstream 33547 13499032 ~ 13499264 (-)
G427049 NA non-coding downstream 46726 13485756 ~ 13486085 (-)
G427064 NA non-coding upstream 55018 13589147 ~ 13589370 (-)
G427076 NA non-coding upstream 75257 13609386 ~ 13609600 (-)
G427077 NA non-coding upstream 78009 13612138 ~ 13613990 (-)
G427130 NA non-coding upstream 247676 13781805 ~ 13782038 (-)
G427136 NA non-coding upstream 270337 13804466 ~ 13804728 (-)
G427057 NA other downstream 24889 13507641 ~ 13507922 (-)
G426147 NA other downstream 493496 12719497 ~ 12805926 (-)
CI01000304_12559311_12559998 NA other downstream 972676 12558854 ~ 12560135 (-)
G426106 NA other downstream 1192583 12336701 ~ 12340228 (-)
G425580 NA other downstream 1659905 11868677 ~ 11872906 (-)
G427154 NA other upstream 397662 13931791 ~ 13950548 (-)
G427309 NA other upstream 655339 14181932 ~ 14237078 (-)
CI01000304_14265881_14269102 NA other upstream 734294 14265476 ~ 14269571 (-)
CI01000304_14286960_14294449 NA other upstream 749542 14286960 ~ 14294449 (-)
G427423 NA other upstream 827319 14361448 ~ 14361892 (-)

Expression


Co-expression Network