CI01000304_13914502_13920992 (ZPLD1)


Basic Information

Item Value
gene id CI01000304_13914502_13920992
gene name ZPLD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13913987 ~ 13920992 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_13914502_13920992.mRNA
ATGAAGAACATCTGCGGTGAGGTGGATTTTCATCTTTGGTTTGGTGACAGCAGAGATCCGGCATTGATAAAAGGGCTGAGGATTATGGGGGTGAAGGTCTCAACGGCTCAGGGGCCCAACGCATATGGGAATCTTTCCCTGGTTCAGATTGGGAATATAGCAGGATACATTGACACTCCGGATCCCCCAACGGTCATCAGCTATCTACCAGGACTGCTTTACAAGTTCAGTTGTAGTTACCCACTGGAATACCTGGTCAACAACACACAGCTTGCTTCGTCAGCTGCAGCGATATCAGTGAAGGACAGCAATGGCACTTTTGTGAGCACGCTGAATTTACTTCTATACAACGACTCCACATACATCCAGCACCTTGCCATCCCAATGTCTGGACTTACTCTGAAGACACGAGTGTTCGCCGCCGTAAAAGCCACCAACCTAGACAGGAGGTGGAACGTTCTGATGGACTATTGTTACACGACTCCCTCTGGGAATCCTAATGATGAACTCCGATATGACCTTTTCTTTGGATGCGATAAGGACCCGCAGACAACAGTGTTTGAGAACGGGAAAAGCCAGATGGGCCGCTTCTCCTTCGAGGTGTTCCGCTTTGTCAAGCACAAGAACCAGAAAATGTCCACCGTCTTTCTGCACTGCGTGACCAAGCTGTGTCGTGCTGACGACTGCCCCCTGCTCTTACCTATTTGCGGTAAGAGGAGGAAAAGGGACACGTCGGAAAGAACCGGTGTGGCCTCTGACAACGCAGTCATGACCGCCGGACCCATCATCACCCGAAGTGATGAAACTCCCACCAATAATTCACAACTAGGGTTTAAGATCAGTTACATGAAGAACATAAGCAGAGGTATCTAATAGACCTGCCTAACACATATTTCTAGCTCAGTGAGAATATTAGAGGCTATATAGGATTGAATGTGAGGAGTCTATTCATCACAACTGCACAAAGGATCTTGGGACACCAGCGATTCCAAGTGCATTACTCTCTACAATAATTAGTTTGAGTTACAAGTTCTGAGAGAGAGACCATAGGGAACGAATTTAATTAAGTCGAACAGCAACCTAGATCACTATGCTATGTGATTGAGGTGGATGCGAAGACTATTTAAGATATTTTTAGTTTTAATTAATTGTATTTGTTTTTACTCATTAGTATTCATACGTCTCTGTGATACCCACTGAACAGTAATGAGTCTTAGCAGTTAGTTTCACTCTAATATTCAGTGTTAGTTTTTTTTTTAATTAAAGATATTTGAATGAAATTTATGTCCAAGATAATTTAATTAAATGTAACAACCCATGTTATTATCCCCCAAACACACATTTGTATTACTTTGTAGGTTTTTCTTTCCTAGTTTTTTAACAATAAA

Function

symbol description
zpld1 Predicted to be an extracellular matrix structural constituent. Predicted to be located in cytoplasmic vesicle membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface and extracellular space.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_13914502_13920992.mRNA True 1388 mRNA 0.43 9 13913987 13920992

Neighbor

gene id symbol gene type direction distance location
CI01000304_13903994_13909017 NA coding downstream 4970 13903716 ~ 13909017 (-)
CI01000304_13741930_13742220 NA coding downstream 171119 13741694 ~ 13742868 (-)
CI01000304_13692322_13711234 ALCAMA coding downstream 202753 13691958 ~ 13711234 (-)
CI01000304_13541959_13564807 NA coding downstream 349180 13541225 ~ 13564807 (-)
CI01000304_13532811_13534129 NA coding downstream 379858 13532811 ~ 13534129 (-)
CI01000304_13979830_13985175 NA coding upstream 58798 13979790 ~ 13985589 (-)
CI01000304_14009988_14011059 TMEM126A coding upstream 88870 14009862 ~ 14011169 (-)
CI01000304_14223930_14229132 NA coding upstream 302175 14223167 ~ 14229166 (-)
CI01000304_14265881_14269102 NA coding upstream 344484 14265476 ~ 14269571 (-)
CI01000304_14271696_14274827 NA coding upstream 350261 14271253 ~ 14276042 (-)
G427144 NA non-coding downstream 43942 13869788 ~ 13870045 (-)
G427136 NA non-coding downstream 109259 13804466 ~ 13804728 (-)
G427130 NA non-coding downstream 131949 13781805 ~ 13782038 (-)
G427077 NA non-coding downstream 299997 13612138 ~ 13613990 (-)
G427076 NA non-coding downstream 304387 13609386 ~ 13609600 (-)
G427154 NA non-coding upstream 10799 13931791 ~ 13950548 (-)
G427155 NA non-coding upstream 36667 13957659 ~ 13959624 (-)
G427174 NA non-coding upstream 55947 13976939 ~ 13978156 (-)
G427225 NA non-coding upstream 161383 14082375 ~ 14084375 (-)
G427309 NA non-coding upstream 260940 14181932 ~ 14237078 (-)
G427057 NA other downstream 406065 13507641 ~ 13507922 (-)
G426147 NA other downstream 874672 12719497 ~ 12805926 (-)
CI01000304_12559311_12559998 NA other downstream 1353852 12558854 ~ 12560135 (-)
G426106 NA other downstream 1573759 12336701 ~ 12340228 (-)
G425580 NA other downstream 2041081 11868677 ~ 11872906 (-)
CI01000304_14286960_14294449 NA other upstream 362679 14286960 ~ 14294449 (-)
G427423 NA other upstream 440456 14361448 ~ 14361892 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location