CI01000304_14005720_14006514 (CREBZF)


Basic Information

Item Value
gene id CI01000304_14005720_14006514
gene name CREBZF
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14005720 ~ 14006860 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_14005720_14006514.mRNA
AGTTTCCTCAATTCATATACTAAAAAAACAGCCATGATCACCAGAAAAAGAGGAAGAAGCAGCCTTAACGATGATGGCACATCTACAAGTACCTCCCATGAGAGTGATGGCACTTCGAAAACCAGTAATTCAAGCGAAACAAACACGCACACTTCTCCAGAAAGTGACACCAATGACTGGGGCCTGGATGACCTACTTGGCTCTGAGTTCAACTGGGACCTGGACAACGATGTGCTGGATGTTTTTGGCAACCTTGCCTCACAGACCAACGATGAGATGAGCCAAAGTGCAGTGCTTGACGTTCCGGTATCCCGCAGCAGAGGTGTGGTCCAGAGGTCAAAACTGCAAGACGTCTCCGGTCGGATCATCAACAAGAATGCCATTGCGGCAAGGATGAACAGATTAAAGAAGAAAGAATACGTCAGTGGCTTGGAGCAGAGAGTTGGCTCTTTGACAACAGAAAACCGTGTTCTCAAGCAGGAAAATGGGAATCTCAACAAGAGAGTGGAAGAGTTGGAGAATGAAACTAGGTACTTGAGAGCCGTGTTGGCCAATGAGAGCATGCTGGCACAGCTGTTGTCTAGATTGAGCGGTGTGAACGGCATGAAATTCTCTACCTCACTTTTCCAGGAATCCAACGAGAATGACCACGATTATGCCATGCCGAGGAAGAGGGTGAAGGTGGAAGACAAAGATACTGCAGGTGGTGTCTGCCTGCATGTGGATAAAGACCACGTCTCGGTGGAATTCTGCACCAAGTGTGCTGAGAGTTCAAGCTTGTCGCATAAAATGTAGGGTCAAGTATTTTACCTTTTCAACGTTTCCCGAGACTGAACATTGCACAAGGTGTAAATGAGGGGACATGACAACAGTAGTCAAATATAGAGTTAACTGTTTAAAATGTGTGCAGAGCTTGAATGGCATGTCTATTGAACCTGCTTTCAATACAAGTTACTGCTAAACTTGTTGACAGTTTTCTTCTAGGTGCTTGGTCCGCCATGCTGGACGCCTGGGTCACAGAACATCCACGACTGCTGAAATCCATGGTAAGGATCAAGATATAGAAGACTACACAGAACTGGTTAACTCCTAAGATGAAGACAGTGCTTTTTGCCAGTTCACGGCACAATATGAACTGTAA

Function

symbol description
crebzf Predicted to enable transcription cis-regulatory region binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human CREBZF (CREB/ATF bZIP transcription factor).

GO:

id name namespace
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_14005720_14006514.mRNA True 1141 mRNA 0.46 1 14005720 14006860

Neighbor

gene id symbol gene type direction distance location
CI01000304_13989055_14004354 SYTL2A coding upstream 1194 13989055 ~ 14004526 (+)
CI01000304_13947668_13967998 PICALMA, PICALM, PICA coding upstream 36530 13946158 ~ 13969190 (+)
CI01000304_13932457_13932762 NA coding upstream 72636 13931949 ~ 13933084 (+)
CI01000304_13744571_13748279 NA coding upstream 257402 13743675 ~ 13748318 (+)
CI01000304_13731299_13731640 NA coding upstream 274070 13731242 ~ 13731650 (+)
CI01000304_14011581_14044797 NA coding downstream 4466 14011326 ~ 14044960 (+)
CI01000304_14108490_14112755 NA coding downstream 101630 14108490 ~ 14113061 (+)
CI01000304_14131633_14155156 NA coding downstream 123979 14125318 ~ 14155278 (+)
CI01000304_14179009_14221165 NA coding downstream 172149 14179009 ~ 14223133 (+)
CI01000304_14231227_14261460 NA coding downstream 224213 14231073 ~ 14262163 (+)
G426307 NA non-coding upstream 27558 13976965 ~ 13978162 (+)
G426592 NA non-coding upstream 132602 13872905 ~ 13873118 (+)
G426526 NA non-coding upstream 264160 13739700 ~ 13741560 (+)
G426348 NA non-coding upstream 316124 13680625 ~ 13689596 (+)
G426377 NA non-coding upstream 386990 13615987 ~ 13618730 (+)
G426362 NA non-coding downstream 44888 14051748 ~ 14062044 (+)
G426375 NA non-coding downstream 78178 14085038 ~ 14095622 (+)
G426352 NA non-coding downstream 108889 14115749 ~ 14123481 (+)
G426343 NA non-coding downstream 229017 14235877 ~ 14241431 (+)
CI01000304_13578347_13595075 NA other upstream 426873 13578049 ~ 13595097 (+)
G425718 NA other upstream 1566634 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 3450016 10555216 ~ 10572164 (+)
G424251 NA other upstream 3812825 10188822 ~ 10189404 (+)
G424246 NA other upstream 3878398 10116343 ~ 10127322 (+)
G426312 NA other downstream 323188 14330048 ~ 14330886 (+)
G426828 NA other downstream 942030 14948890 ~ 14950592 (+)
G427860 NA other downstream 1878594 15885454 ~ 15889591 (+)
G428017 NA other downstream 2076370 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 2498002 16504764 ~ 16513625 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002843 NA non-coding NC_007121.7 CM002894.2 29266270 ~ 29491087 (-)