CI01000304_15040739_15045239


Basic Information

Item Value
gene id CI01000304_15040739_15045239
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15040552 ~ 15045257 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_15040739_15045239.mRNA
CAATAAATAACAAGCTCCAAACCTGATGTAAAACATGCTAGGTGCAGTTTCATACATCACAAAGTCAAGAAAAGTTGATCAAATGTGTGTCAAATCAAACATGACAACAATAGTCCAGAGTAGAACCTACACGTTTGTCCATTACAAAGCAAAGCAAAGCAAAGCAAAGCCAGTTGAGTTGGTGGTCATGCTGAAAAACTTGGAATATCCTGGAACTCATCCCATACACTCATATATCCGGAGGTTCTTATACAGGGAGATTGTGGGAATGGAGTGGGAAAAACGGCAGAACAAAGCATCGAAGGGAGCAGGGCTCATTGGGAGTCTGAGCTGGAGGCTTTGTAGGCCAGCCAGCTGGACATACAAAGAGAGTAAGAACGAGAGAGAGAGAAAGAAAGCAAAAGGGGGATGCAGAGCCGGAGAGCTTACAGCCTTAAATGAATTGGGAGGTTTTGGAATTAAACCCCGATCAGGTCAGTGTGAAAATCGAAATGATATCCACTTCGAGCGAAACGTCTTCACTTCGACAAATGAGAACGTTCCAGTTGCATTAACGATTCGGTCCGTTCACCTCTCCTCTAGGCGTAAAATAGAAATTGTGTTGAGAAAGTGCGAATCCCCCCAAACAAAAGCCGTCCCTTTCATGACCGACAAGCAGCCAAAGCCTTTGGAGAGGAGCGCGAGAGTTTGTCATTCTGAAGGATTTGATCAGTCGACTAGCAGACACTTGATTAATGGAACTGATCCCTTTCGGTATGGGAGATCCCCTTCCGTCCCCTCCCCGTTCGCTCCCGGGCCTTGTTTTCCGTCTTTGGGACGTGCAGAACGAATGACACAGATGTTGTTGGAGGAGACAGTCCCCGTCCCTCTCCTCCTCTCCCGCGCTCCCAGCATGGGGCCTGAAACTTGTTTTTCAATCATTGTTTCCGCCAACTTCTTTCCCAAAAGAGAAAAGCGAGGCGAGAAAGAGGAGGGAGAGAGCGGAGGGGAGCGCTAAATAAAAGAGGGAGGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_15040739_15045239.mRNA True 1015 mRNA 0.47 5 15040552 15045257

Neighbor

gene id symbol gene type direction distance location
CI01000304_15034188_15038152 TMEM218 coding upstream 2054 15032081 ~ 15038498 (+)
CI01000304_14695603_14740389 NTM coding upstream 299473 14695603 ~ 14741079 (+)
CI01000304_14356867_14373980 NA coding upstream 665886 14356586 ~ 14374666 (+)
CI01000304_14352375_14355516 HSP70, HSP7C, HSPA8, HSPA1L.S coding upstream 685036 14352375 ~ 14355516 (+)
CI01000304_14331169_14331855 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding upstream 708579 14331064 ~ 14331973 (+)
CI01000304_15047768_15063987 ROBO4 coding downstream 2511 15047768 ~ 15064170 (+)
CI01000304_15140709_15147357 NA coding downstream 95304 15140561 ~ 15147557 (+)
CI01000304_15148523_15151340 NA coding downstream 102577 15147834 ~ 15151395 (+)
CI01000304_15231039_15234179 NA coding downstream 185782 15231039 ~ 15234583 (+)
CI01000304_15265823_15269133 MSANTD2 coding downstream 219711 15264968 ~ 15269591 (+)
G426853 NA non-coding upstream 96692 14943644 ~ 14943860 (+)
G426851 NA non-coding upstream 98338 14941924 ~ 14942214 (+)
G426834 NA non-coding upstream 108625 14931691 ~ 14931927 (+)
G426833 NA non-coding upstream 109759 14930508 ~ 14930793 (+)
G426920 NA non-coding downstream 104585 15149842 ~ 15150398 (+)
G426923 NA non-coding downstream 130022 15175279 ~ 15175635 (+)
G426928 NA non-coding downstream 149052 15194309 ~ 15194689 (+)
G426929 NA non-coding downstream 154607 15199864 ~ 15200129 (+)
G426930 NA non-coding downstream 157392 15202649 ~ 15202986 (+)
G426828 NA other upstream 89960 14948890 ~ 14950592 (+)
G426312 NA other upstream 709666 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1461705 13578049 ~ 13595097 (+)
G425718 NA other upstream 2601466 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4484848 10555216 ~ 10572164 (+)
G427860 NA other downstream 840197 15885454 ~ 15889591 (+)
G428017 NA other downstream 1037973 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1459605 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1710689 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1965473 17009769 ~ 17023882 (+)

Expression


Co-expression Network