CI01000304_15140709_15147357


Basic Information

Item Value
gene id CI01000304_15140709_15147357
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15140561 ~ 15147557 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_15140709_15147357.mRNA
ATATATAAACGAATCCTAAATGCTTAATCTTTAGAGTGGAGCAAATGGGACTTCCTGACACATCAGATCTTATCTTAAAGCTAAGGCTCATCTGGCCACTCCATTGCTTTAAGAACCTTCTCAATTCACAAAATAAACAGTACTTCAAATGAACCTTCTGCTGGGCAGTAGCAACATCCAGCAGAAGGTATTGATCCCTCTGTGGATTCCCATGAGTAGACTTGCCGGAAAAGAGGAGGGGAATAAATACAATTCTTTCAGCAGTTCGACCTGTTATGCCCCGTTAATGGAAGTGGCCCGGTTGGAGCGAATAGCATACCAAGACTGGTTGAGATACCATCAGCTTCCTGGTCCTCCTAGTGGTGCACCACGTTCCGCTGGATTAATCCCACCTCGCACTTTCCGCTTGACCCCAACATCCCTAGGAAAAGCAGCAGATTCCTGTTGTAATAGAAACTATTTAGCATATAATAGAGCTGATAATATCAAAGTCTTGTCACACGTCTATGGAGACAAGGACAACAGCCTGTTAACACTTCAATCGCTCCGACAGAGACAAAGACAAAGTATACTTACAACGTGGAAAAACATTCACCACATTCTTTGCATTGCACTCAAGGACCAATTCCAGCTCTGCCAAGCTGCGATTTTGATCTACACGGCCATTAAACGACAACCGCGCACGTGGCCCCTGCAGTGCCCCACGGCTGCCCACACCTTCTTTACACACACTCGCACACAGATAAACCACAGAACCCACTTGAAACCATCCAAAGTCCTCAACAAGCTTATCCTAATCGGTATATTTACATGTTTAAAGAGTGTGAGAAGGCTAAAGGAGACAGCCAGCGGCCCTTACCACATACCTGCACTGGATTAAGTCAGAGGCGTGGGAAAAGAACGGGACAGCGCGTAACACTAAATTCAACTACACCAAATTAATCCAGACTCACTTCTTGGATGGTTATGAGCCTGTTATAGAGAATGAAAAGGGTTTTAACTTGACCAGATTTGCTCATGAAACAGAAGAAGAGCACAGTATTGACAACACGACTGAGACTGGACTATAGATCTAGTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_15140709_15147357.mRNA True 1080 mRNA 0.45 5 15140561 15147557

Neighbor

gene id symbol gene type direction distance location
CI01000304_15047768_15063987 ROBO4 coding upstream 76391 15047768 ~ 15064170 (+)
CI01000304_15040739_15045239 NA coding upstream 95304 15040552 ~ 15045257 (+)
CI01000304_15034188_15038152 TMEM218 coding upstream 102063 15032081 ~ 15038498 (+)
CI01000304_14695603_14740389 NTM coding upstream 399482 14695603 ~ 14741079 (+)
CI01000304_14356867_14373980 NA coding upstream 765895 14356586 ~ 14374666 (+)
CI01000304_15148523_15151340 NA coding downstream 277 15147834 ~ 15151395 (+)
CI01000304_15231039_15234179 NA coding downstream 83482 15231039 ~ 15234583 (+)
CI01000304_15265823_15269133 MSANTD2 coding downstream 117411 15264968 ~ 15269591 (+)
CI01000304_15315146_15318470 ESAMA coding downstream 167589 15315146 ~ 15319987 (+)
CI01000304_15348138_15379777 FOXO1B, FOXO1 coding downstream 200401 15347958 ~ 15380003 (+)
G426853 NA non-coding upstream 196701 14943644 ~ 14943860 (+)
G426851 NA non-coding upstream 198347 14941924 ~ 14942214 (+)
G426834 NA non-coding upstream 208634 14931691 ~ 14931927 (+)
G426833 NA non-coding upstream 209768 14930508 ~ 14930793 (+)
G426920 NA non-coding downstream 2285 15149842 ~ 15150398 (+)
G426923 NA non-coding downstream 27722 15175279 ~ 15175635 (+)
G426928 NA non-coding downstream 46752 15194309 ~ 15194689 (+)
G426929 NA non-coding downstream 52307 15199864 ~ 15200129 (+)
G426930 NA non-coding downstream 55092 15202649 ~ 15202986 (+)
G426828 NA other upstream 189969 14948890 ~ 14950592 (+)
G426312 NA other upstream 809675 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1561714 13578049 ~ 13595097 (+)
G425718 NA other upstream 2701475 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4584857 10555216 ~ 10572164 (+)
G427860 NA other downstream 737897 15885454 ~ 15889591 (+)
G428017 NA other downstream 935673 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1357305 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1608389 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1863173 17009769 ~ 17023882 (+)

Expression


Co-expression Network