CI01000304_15148523_15151340


Basic Information

Item Value
gene id CI01000304_15148523_15151340
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15147834 ~ 15151395 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_15148523_15151340.mRNA
ATATATATAGCCTACCCTTCATCCCTGAGTTGAAACTCTGAATGAGGGGTCCTTGAGATTGTAAAAGTTGAAAAACCCCAATACAGTGCATTAGTGAAAATGTGTTAATTAACAGAAGTGTAGTTTTTCAATATGCTCTCTCTCTCTCCCTAAGAGAATCCTCTTGAATTCAAGTGCTGCTCTGTCCTAAAGTAAGTGCATTTACTGTAAACTGGGTCAACTGGTCTGTTTCGACCATATGTTCAAGTATAAACACTATGTATTAAGGATAAACCTATAAATCATCTGTTTACACTAAAAGTATTGTATATTTAAGTTATATTCTTCTTAAAAGAAGTAATTATTGTAATTAAATAAAAAAATATTTGATTTTACTATTACTTAAGCTGAAGAATATCTCTTCAACCAATACATGTCGATACTTTGAATATTAGAAAAAAATTGCATGCTATAAAACTTCTGCTGCTATCTATAAGGGCTGTCTCTATCTATGTAAAGGATGCGCATCATCACCGTACAACCTAAATAACATCAATACCTCAACAAATTACCACCACAAATAAGACAATATTTACGTTCAGAAACACCAGAGAAGATGTCGACAGCTAATTCACAATGTTTTACGATTATAATCCTCATATAGCCATCTGTCGTGTTGTATTTTCTCCAGCTTACCTTGAGATAAGCAGATGAGGGCAAACGAAACGAGTAGCGCATCTAAAGTCCTGCGAAACTCCATCACCCTCAGATATAAAGTCCACTTCAGTCGCCTTTATCCGGACAAACAGTCCCTAAAATCATCCAAAAAGCGCTACAATCCGGTCGAATGGAGGACAGTCGGCGCCTGGAGTACACGGGGAGCTTCTGGAGCTAGTACCCTTGATATTGTCCTCATGTATGATGCATGAGCAAGTTTAACTTAATTGCAAAAAACTGATTAATTGAGCTTCAGTGTGTAATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_15148523_15151340.mRNA True 963 mRNA 0.36 2 15147834 15151395

Neighbor

gene id symbol gene type direction distance location
CI01000304_15140709_15147357 NA coding upstream 277 15140561 ~ 15147557 (+)
CI01000304_15047768_15063987 ROBO4 coding upstream 83664 15047768 ~ 15064170 (+)
CI01000304_15040739_15045239 NA coding upstream 102577 15040552 ~ 15045257 (+)
CI01000304_15034188_15038152 TMEM218 coding upstream 109336 15032081 ~ 15038498 (+)
CI01000304_14695603_14740389 NTM coding upstream 406755 14695603 ~ 14741079 (+)
CI01000304_15231039_15234179 NA coding downstream 79644 15231039 ~ 15234583 (+)
CI01000304_15265823_15269133 MSANTD2 coding downstream 113573 15264968 ~ 15269591 (+)
CI01000304_15315146_15318470 ESAMA coding downstream 163751 15315146 ~ 15319987 (+)
CI01000304_15348138_15379777 FOXO1B, FOXO1 coding downstream 196563 15347958 ~ 15380003 (+)
CI01000304_15423818_15456305 LHFP coding downstream 270216 15421611 ~ 15456881 (+)
G426853 NA non-coding upstream 203974 14943644 ~ 14943860 (+)
G426851 NA non-coding upstream 205620 14941924 ~ 14942214 (+)
G426834 NA non-coding upstream 215907 14931691 ~ 14931927 (+)
G426833 NA non-coding upstream 217041 14930508 ~ 14930793 (+)
G426923 NA non-coding downstream 23884 15175279 ~ 15175635 (+)
G426928 NA non-coding downstream 42914 15194309 ~ 15194689 (+)
G426929 NA non-coding downstream 48469 15199864 ~ 15200129 (+)
G426930 NA non-coding downstream 51254 15202649 ~ 15202986 (+)
G426941 NA non-coding downstream 70226 15221621 ~ 15222701 (+)
G426828 NA other upstream 197242 14948890 ~ 14950592 (+)
G426312 NA other upstream 816948 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1568987 13578049 ~ 13595097 (+)
G425718 NA other upstream 2708748 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4592130 10555216 ~ 10572164 (+)
G427860 NA other downstream 734059 15885454 ~ 15889591 (+)
G428017 NA other downstream 931835 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1353467 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1604551 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1859335 17009769 ~ 17023882 (+)

Expression


Co-expression Network