CI01000304_15231039_15234179


Basic Information

Item Value
gene id CI01000304_15231039_15234179
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15231039 ~ 15234583 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_15231039_15234179.mRNA
ACACAGGCGCAGTGGGAGCAGAGGTCTCAATGGTGCTACAGTCTCAGTATTATCATTGCTCACCAAATCAGATAACGCAAGCTGTGATAAGCTTCTTTTCAAAGTAAAAAATTTAAGAGAAAGATCGTCCTCACCATTGAGACCAGTGAAGTTGGCCCAGTCCAGCAGAGACGAGTTGAAAGACGGGATGGAGGAGATGTTGAAGAACAGTCCTCTGGTTCTCGGAGTGAAGCTGAGAGTAGATATTGGAGTTCCTCGCTCGACCAGGGTGGAAGAAATTATTTCCTTAATTCAGTCCTATTGGAAACAATCACGAAAATGGCAATAAAAGTCCATTCAGGCAGAAGAAGGAAACTTTTCTCATTAGTTGTCAGCACTCGGAGGGATGTCTCGATGAAGGGGGGCGCCCCTCTTTCATCCTTCTGTTGTTCTTCTCTTGTGGAACGTGTTAAATTCGTCTTCGTCTTTTGTCCTTTGTTGTGGAGTCACATAACTTCACACACGTTTGTCCTTCTGCACAATAACACCTCGCTGGTGTGAAAGAATCTGGCTATCTGATGACCCTCCTGAATCGCTGCTCTTTTTCCCCACCCCTCCCACTTTCGCTCGTTCCGTCTCGCTCTCCCTCCTCCCTCACCCCTCCCTCTCCTCTTCCTATCCTCTGGCTTCCTGTGATGGTGTGATTGAGTCCCCAGGGGCCACCGAAAGAGGGGAGAGCAGGTGCTGTTGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_15231039_15234179.mRNA True 732 mRNA 0.48 3 15231039 15234583

Neighbor

gene id symbol gene type direction distance location
CI01000304_15148523_15151340 NA coding upstream 79644 15147834 ~ 15151395 (+)
CI01000304_15140709_15147357 NA coding upstream 83482 15140561 ~ 15147557 (+)
CI01000304_15047768_15063987 ROBO4 coding upstream 166869 15047768 ~ 15064170 (+)
CI01000304_15040739_15045239 NA coding upstream 185782 15040552 ~ 15045257 (+)
CI01000304_15034188_15038152 TMEM218 coding upstream 192541 15032081 ~ 15038498 (+)
CI01000304_15265823_15269133 MSANTD2 coding downstream 30385 15264968 ~ 15269591 (+)
CI01000304_15315146_15318470 ESAMA coding downstream 80563 15315146 ~ 15319987 (+)
CI01000304_15348138_15379777 FOXO1B, FOXO1 coding downstream 113375 15347958 ~ 15380003 (+)
CI01000304_15423818_15456305 LHFP coding downstream 187028 15421611 ~ 15456881 (+)
CI01000304_15462162_15465511 NA coding downstream 227579 15462162 ~ 15465511 (+)
G426941 NA non-coding upstream 8338 15221621 ~ 15222701 (+)
G426930 NA non-coding upstream 28053 15202649 ~ 15202986 (+)
G426929 NA non-coding upstream 30910 15199864 ~ 15200129 (+)
G426928 NA non-coding upstream 36350 15194309 ~ 15194689 (+)
G426923 NA non-coding upstream 55404 15175279 ~ 15175635 (+)
G426951 NA non-coding downstream 19342 15253925 ~ 15255239 (+)
G426933 NA non-coding downstream 87433 15322016 ~ 15333685 (+)
G426931 NA non-coding downstream 104711 15339294 ~ 15341816 (+)
G427721 NA non-coding downstream 225804 15460387 ~ 15460626 (+)
G427723 NA non-coding downstream 255736 15490319 ~ 15490525 (+)
G426828 NA other upstream 280447 14948890 ~ 14950592 (+)
G426312 NA other upstream 900153 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1652192 13578049 ~ 13595097 (+)
G425718 NA other upstream 2791953 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4675335 10555216 ~ 10572164 (+)
G427860 NA other downstream 650871 15885454 ~ 15889591 (+)
G428017 NA other downstream 848647 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1270279 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1521363 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1776147 17009769 ~ 17023882 (+)

Expression


Co-expression Network