CI01000304_15322368_15331609 (FEZ1)


Basic Information

Item Value
gene id CI01000304_15322368_15331609
gene name FEZ1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15321790 ~ 15331739 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_15322368_15331609.mRNA
ACTTTCAGCGTTTTATGTTTTAGATGGTGATTTGAGATGTTGAATGACATATTGACAATTACTATATTTTTAATCAGGGATTGCTGCAGCGCCGAACTCCACGTGACTGTGCGATCAAGAGGGCATCAGGATGGAGGCCCCTCTGGTGTGCCTGGATGAGGAATTCGAGGATCTGCGGCCCTGCAAGATGGAGGAGCTTGAATCTGAGCAGCCTCCCTGCCGGCCTCACAAAACAATTCCTCTGGCCCCGCTGTGCCGTGAAGACTTCTCCGAGCTAGAGAACTTCTCTGAGATGATGAGCTTCAAGTCCATGGAGGACCTGGTCAATGAATTTGACGAAAAGCTGAACGTGTGCTTCCACAATTACAACACCAAAACAGAAGGCCTGGCACCCATACGCAACCAATCACATGCCGAGGAGGATGAGGAGAGGCTTCAAGATGAAGACGTGTGGGATGCTCTGACTGACAACTACATCCCTTCCTCTGTGTCCAGCTGGGACGACCCCACCTCAGAAACGCTGAATGGCAACCTCTCAGATCAGGAGATACATGAAAAAGATGAGGATGAGATGAACGAGAAGAACGAAAATGCCAACTGTCTGAGTGAAGAACCTCTGATTACAGCTGATCAGGTGATTGAGGAGATTGTGGAGATGATGGAAAACTCACCAGATCCTGGAGAGACAGAGGAAGAGGAGGATGATGATATCGGGGTTTCTTCCTCTAAAAGCAGCCCCTCCCTACTGGAGGAGATCCGCATGCTGTCTCAGGCCTCCAACAACAACTGCTCTTATGAAGGTCTGAGGCTGATGCCAAGCTCGGCGCTGCTTGACATCTTGTGTCGGATGGAGGCGGCGATACGAGAGTATTCGGAGGAACTGGTGGCTCAGCTGGCCCGGAGGGATGAGCTGGAGTTTGAGAAAGAGGTGAAGAACACCTTCATCACAGCTCTAATGGAGGTCCAGAACAGACAGAAGGAGCAAAGGGAGCTGAGCAAGCGCAGGCGTAAGGACAAGGCCATGAGTCTACAAGCAACAACCCGCTCCGAGAAGACTGGGACCATGCCTGCGAAACGCTTCAGCATGGAGGGTCTGTCCAACATCCTGCAGACAGGGATCAGACAGACCTTTGGGACCTCAGGGACAGAAAGACAGTACCTAAACACAGTCATCCCATATGAGAAAAAAGGGACTCCTCCATCTGTGGATGACTTGCAAATGCTCACAAAAATTCTCCAGCCCAGCTGCATGAGCTCCCTTACCCAGTATCAGCGAGGGACCCTGAACATCTAACCATCCTTCTCTTGCTTATCTAATGACCTTTGACCTTGCTCATCTCACTGCCCTTCCTGTATTCACATATCCATGAGGTTCATACCACAACGCCTGGTGCTTTACATGTTTTCTACTATGTACGTTATTTCGGGCCAAAAGCCATATGGAACGTGTAAGGATAACAGGTGAACTATAATCAGTTTAACTCTACAATCAGGTACTATTTTTATTTTTAAGGATATGCATAACAACATAATACTCGACCATTCACATCCATTCTGAACACAGGTGATGATGAGAAGGGCATTATTCACAATCTTCTTAAGGCGCAGATGCATTGATTTCGAGAGCACATTTGAAAATAATCCATCCAAACATTCTGCTTTTTGCCGTTTTAGTATTGTGGCTTCATTTCAGCCAAGGTTGGTTGAAGATACAGCATGTTTTAGTGTTCTACATTAATGCCAAGTTATAGGGAGAAACCTTGTGACTTTTTTTATTTTGGGTAACCTGAGTTTTGTTTTTCATCCTATGTATGAAATATACAGTTCTACATAAAGTGTTTTTTTTTTTTGATGATCCATCTGTCTAATAAA

Function

symbol description
fez1 Predicted to be active in axon and cytoplasm. Is expressed in nervous system and neural tube. Orthologous to human FEZ1 (fasciculation and elongation protein zeta 1).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_15322368_15331609.mRNA True 1872 mRNA 0.46 8 15321790 15331739

Neighbor

gene id symbol gene type direction distance location
CI01000304_15132805_15136196 ROBO3, ROBO2 coding downstream 185594 15132227 ~ 15136196 (-)
CI01000304_15075003_15110723 ROBO3 coding downstream 210794 15074301 ~ 15110996 (-)
CI01000304_14957226_14983228 PKNOX2 coding downstream 338562 14956603 ~ 14983228 (-)
CI01000304_14949765_14955677 PANX3 coding downstream 366113 14949187 ~ 14955677 (-)
CI01000304_14834446_14835469 NA coding downstream 486241 14834414 ~ 14835549 (-)
CI01000304_15341701_15346353 VPS26BL, V26BL, VPS26B, V26BB coding upstream 8826 15340565 ~ 15347178 (-)
CI01000304_15584327_15694046 UVRAG coding upstream 252588 15584327 ~ 15694046 (-)
CI01000304_15703390_15711806 DGAT2 coding upstream 371433 15703172 ~ 15712119 (-)
CI01000304_15715861_15722546 MOGAT2 coding upstream 383685 15715424 ~ 15722546 (-)
CI01000304_15755554_15770449 NA coding upstream 422737 15754452 ~ 15770768 (-)
G427657 NA non-coding downstream 46121 15275216 ~ 15275669 (-)
G427632 NA non-coding downstream 118289 15203264 ~ 15203501 (-)
G427631 NA non-coding downstream 127131 15194276 ~ 15194659 (-)
G427588 NA non-coding downstream 406119 14915463 ~ 14915671 (-)
G427583 NA non-coding downstream 459922 14861400 ~ 14861868 (-)
G428340 NA non-coding upstream 134186 15465925 ~ 15466511 (-)
G428376 NA non-coding upstream 155640 15487379 ~ 15487595 (-)
G428377 NA non-coding upstream 156188 15487927 ~ 15488140 (-)
G428378 NA non-coding upstream 156718 15488457 ~ 15488714 (-)
G428379 NA non-coding upstream 158070 15489809 ~ 15490014 (-)
G427376 NA other downstream 60385 15258964 ~ 15261405 (-)
G427423 NA other downstream 959898 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 1034186 14286960 ~ 14294449 (-)
CI01000304_14265881_14269102 NA other downstream 1052219 14265476 ~ 14269571 (-)
G427309 NA other downstream 1113491 14181932 ~ 14237078 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other upstream 1447625 16769417 ~ 16780398 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other upstream 1522826 16854565 ~ 16860911 (-)
G429331 NA other upstream 2592124 17923863 ~ 17924684 (-)
G429499 NA other upstream 2905980 18237719 ~ 18238319 (-)
G429673 NA other upstream 3254703 18586442 ~ 18591856 (-)

Expression


Co-expression Network