CI01000304_15779082_15779951 (ZBTB21)



Basic Information


Item Value
gene id CI01000304_15779082_15779951
gene name ZBTB21
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15779082 ~ 15780105 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000304_15779082_15779951.mRNA
ATGATGAGTGTAAAGGAACAGTTGACTCTCAGTCTCCAGGAGAGCAATCACGACGAATCATCCAATATTCTCGGAGATGCTCCCACTTCTCAGGAGTTGATACGTGACCCTAGAGAGGAAGCAGTGTACAGCGACTCATCGGTTCCACCCATGTATGATTCTGAAGACTCATCATCTTATGTCCCAGAGGACTTGAGCGCTCACGGTCAAGGGGAGCTGCAGGTCAAAGAGGAACCTCAAGAGGAAGCAGTATCAGCCAAGGATAACGTGAGCACCGGATCCGAGGAACCGGGCGTTTGGCCTTGTGAGAAGTGTGGAAAGCTTTTCAGCAGCCACAAAGACCTGGAACGACATCAGGAACTGCTTTGCCATATCAAACCCTTCATCTGCCACATATGTCACAAAGCGTTCAGGACCAACTTCCGCCTCTGGAGCCACTACCAATCCCACATGTCCACACCTGAAGAGCCAGGGATGAGAGAGATCGACAGGCTTCCGTCTTCTCCATCTCCTTCTCCACCTCTTACAATTTCCATCCCTGAACCTCCAACTTCTCAAAAACCTCCACTCAAAGCGACCTGTTCTGGGGTGGACGCCTCAGAGGAGGAACCCAGAGGCTCCACGTCACCGTCAACCAAACTCAAGAAGCCAGAGCAAGACAAGACTGGTGACGATGAGCCTGGGGAACATTCGCAAGCCAAGTCCGACAGCACAGACAAAACTATCACCCCTCAGGAATCTGACACACTATTTTACCATGCACCAACCCTCTCTGCACTCACCTTTAAACGCCAGTACATGTGCAAATTCTGTCACCGGACATTTAAGACAGCCTTCAGTCTGTGGAGTCACGAGCAGAGCCATACGTAAGAGTGCTAAACGCAGTTGCACATTTGTAGCCCTTAACAATTGGAATCAACTAACTTGGACCATTTCTCCTTTAAACATGATTTACTGTGGTACACACTTGCAGCCTAAACCCAGGGATTTATTAATAGCATTTGATCATACTTATCTTATTTCT

Function


symbol description
zbtb21 Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to human ZBTB21 (zinc finger and BTB domain containing 21).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000304_15779082_15779951.mRNA True 1024 mRNA 0.49 1 15779082 15780105
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Neighbor


gene id symbol gene type direction distance location
CI01000304_15776859_15777750 ZBTB21 coding upstream 1314 15776859 ~ 15777768 (+)
CI01000304_15723867_15741978 NA coding upstream 36219 15723867 ~ 15742863 (+)
CI01000304_15500233_15509862 WNT11, WNT11.L, WNT11R coding upstream 268366 15500233 ~ 15510716 (+)
CI01000304_15483378_15486113 NA coding upstream 292696 15483378 ~ 15486386 (+)
CI01000304_15472687_15483327 NA coding upstream 295755 15472687 ~ 15483327 (+)
CI01000304_15785399_15786785 RAD51C coding downstream 5294 15785399 ~ 15787028 (+)
CI01000304_15817532_15846675 PPM1E coding downstream 35671 15814649 ~ 15846892 (+)
CI01000304_15896045_15897082 NA coding downstream 115940 15896045 ~ 15897843 (+)
CI01000304_15964692_15966904 NA coding downstream 183811 15963916 ~ 15967493 (+)
CI01000304_16040037_16043960 NA coding downstream 259932 16040037 ~ 16043960 (+)
G427906 NA non-coding upstream 37978 15740258 ~ 15741104 (+)
G427844 NA non-coding upstream 63961 15714842 ~ 15715121 (+)
G427843 NA non-coding upstream 64746 15713909 ~ 15714336 (+)
G427777 NA non-coding upstream 71685 15705318 ~ 15707397 (+)
G427811 NA non-coding upstream 120024 15658518 ~ 15659058 (+)
G427915 NA non-coding downstream 29098 15809203 ~ 15812033 (+)
G427917 NA non-coding downstream 32998 15813103 ~ 15814423 (+)
G427904 NA non-coding downstream 60806 15840911 ~ 15851136 (+)
G427889 NA non-coding downstream 86061 15866166 ~ 15931957 (+)
G426828 NA other upstream 828490 14948890 ~ 14950592 (+)
G426312 NA other upstream 1448196 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2200235 13578049 ~ 13595097 (+)
G425718 NA other upstream 3339996 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 5223378 10555216 ~ 10572164 (+)
G427860 NA other downstream 105349 15885454 ~ 15889591 (+)
G428017 NA other downstream 303125 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 724757 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 975841 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1230625 17009769 ~ 17023882 (+)

Expression


CI01000304_15779082_15779951(ZBTB21) Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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CI01000304_15779082_15779951(ZBTB21) Expression in each Bioproject

Bar chart with 44 bars.
CI01000304_15779082_15779951(ZBTB21) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network