CI01000304_16044458_16066649


Basic Information

Item Value
gene id CI01000304_16044458_16066649
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16044458 ~ 16066649 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_16044458_16066649.mRNA
CCTCAGCAGCTATTTATCAGGTTCCAGTGAGACTGCAGCGCACAGTGTCCGAACACAACACTGGAGCCAACACACTCAACAGGAACTGGTGCCAGTACACAGTACAGAAGACCATTTCATGTCAGACACAAAATGGGACAGAGACTGTTGTTCAGCGACTGTTTCAGAGTTGCCGATGGCCTGGACCGTGTTCAAACCTCATCAGCTACAGAACTCTGGTGAGACCTGTGTACAGAGTGACCTACAGGAAAATCACTTCTCTGGAATGGCGATGCTGTCCAGGATTCCATGGGGAAGACTGCAGAGAGGAGTGCATGAACTGTACTGGTTATGCTGACATCAAAGAGCGCTTGAGTGTCATTGAAGCTCAGATAATGTTACTGAGAGATGCCGAGGCACCCCCTCTCCCTCTGTCCAGCCAATCACCTGAGGGAACAGCTGATAATGAGGTGGATAGGGCACACCCCTCACCAATAACACCCAAGGCCATTGGCCGACCAGGACCAAGAGGACAACCAGGACCTGTTGGTCCCCCAGGTCCCCCTGGGCCTCCTGGACCTTTAGGAAAGACAGGGTTTTCTGGAAAACCTGGTCCTATAGGACCTAGAGGACCTCAAGGGCTACAAGGTCCACCAGGAGAAAGAGGCCTTCCTGGGCCACCGGGGCCTGCAGCATCTACTCCCTTCTCCATCAGGGGAGATGTTTTCACTCTAATGGCTAAACAACATGATGCGGATAGTGACTTTGCTGCCTATCGTGACCTGCAGACTTTACTTGGTCCCCCCGGGCCCTCCGGCCCTCCTGGTCCACCAGGCACACCAGGTGACAGGGGACCCAAAGGAGATCCAGGAGAAAGAGGAGTTGCAGGTCCTAAAGGTGAGCCGGGAGAGATTCCGGGGGAGGTGCAGCAGTTAAGGGAAGCGCTGAAGATTCTGGCCGAGAGGGTTCTCATTCTAGAACACATGATCGGCATTCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_16044458_16066649.mRNA True 978 mRNA 0.54 11 16044458 16066649

Neighbor

gene id symbol gene type direction distance location
CI01000304_16032454_16034363 NA coding downstream 10006 16031992 ~ 16034452 (-)
CI01000304_15986032_15996763 CUX1 coding downstream 47695 15985763 ~ 15996763 (-)
CI01000304_15903075_15957836 CUX1A coding downstream 86622 15903075 ~ 15957836 (-)
CI01000304_15891065_15894363 KCTD7 coding downstream 150095 15890803 ~ 15894363 (-)
CI01000304_15882316_15888812 RABGEF1 coding downstream 155646 15881682 ~ 15888812 (-)
CI01000304_16067926_16072192 BCL7BA coding upstream 1238 16067887 ~ 16072192 (-)
CI01000304_16073177_16076377 NA coding upstream 6444 16073093 ~ 16076440 (-)
CI01000304_16077939_16106746 PRDM15 coding upstream 10843 16077492 ~ 16106983 (-)
CI01000304_16123390_16127834 SKA2 coding upstream 56513 16123162 ~ 16128334 (-)
CI01000304_16202982_16207060 NA coding upstream 136171 16202820 ~ 16207117 (-)
G428405 NA non-coding downstream 1745 16039478 ~ 16042713 (-)
G428411 NA non-coding downstream 237700 15800929 ~ 15806758 (-)
CI01000304_15755554_15770449 NA non-coding downstream 289271 15754452 ~ 15770768 (-)
G428451 NA non-coding downstream 292915 15751343 ~ 15751543 (-)
G428450 NA non-coding downstream 293561 15749584 ~ 15750897 (-)
G428517 NA non-coding upstream 55549 16122198 ~ 16122496 (-)
G428519 NA non-coding upstream 63065 16129714 ~ 16130055 (-)
G428500 NA non-coding upstream 65990 16132639 ~ 16137401 (-)
G428521 NA non-coding upstream 79667 16146316 ~ 16153240 (-)
G428533 NA non-coding upstream 131168 16197817 ~ 16199521 (-)
G427376 NA other downstream 783053 15258964 ~ 15261405 (-)
G427423 NA other downstream 1682566 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 1756854 14286960 ~ 14294449 (-)
CI01000304_14265881_14269102 NA other downstream 1774887 14265476 ~ 14269571 (-)
G427309 NA other downstream 1836159 14181932 ~ 14237078 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other upstream 712715 16769417 ~ 16780398 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other upstream 787916 16854565 ~ 16860911 (-)
G429331 NA other upstream 1857214 17923863 ~ 17924684 (-)
G429499 NA other upstream 2171070 18237719 ~ 18238319 (-)
G429673 NA other upstream 2519793 18586442 ~ 18591856 (-)

Expression


Co-expression Network