CI01000304_16255785_16257956


Basic Information

Item Value
gene id CI01000304_16255785_16257956
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16255785 ~ 16258152 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_16255785_16257956.mRNA
ATGAAAGGCTGGCTTTTTAATAAGACACAATATTGCGTCACCACACCCCGGCTAGCCGGCAGCTTGTTTACATTACCATGCGGTCATGAGACGAGCGATGTACAGAGAAGCCAAGTTAAATATTTACCTGGAGCCAGCGATCAATGCCACAAAGTGCCTCCTTGCAATGCTTTTAACGTCAGAAGCTCAGAAAGTCAGAGAAACTCGTATCATACCCACAGGGCTGAACAAAGAAGAACAGAGCTTCTCCATCAGGCTCAGACCCTAAACCAGGTAGTTTTAAGCGATAAAAAGTCTGTAAAATGCAGTTTTGATTAAATTTAGCATAATTGGCACATTTTAAATGTGTTGGTAAATTTATACATATGCTTATTCCTTCATAATAACTTTGTATTGCAGTAATTTTAAAGTTAAGTTTTAAAATCAAGATTCCTGAAAGAGAATTTTGAATTTCATTTCCTTAATTTACAAAAAAGGTGTAGATTCTTGGTTTTACAGGGCACCTCAAATATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_16255785_16257956.mRNA True 514 mRNA 0.37 4 16255785 16258152

Neighbor

gene id symbol gene type direction distance location
CI01000304_16238051_16240914 MIS18A coding upstream 14491 16238051 ~ 16241294 (+)
CI01000304_16228517_16231072 CUNH21ORF59, CSSA11H21ORF59, CLG07H21ORF59, C19H21ORF59, C10H21ORF59, CSGR11H21ORF59, CLG14H21ORF59, C16H21ORF59 coding upstream 24232 16228517 ~ 16231553 (+)
CI01000304_16146512_16201457 RYR1, RYR1A coding upstream 53680 16146201 ~ 16202105 (+)
CI01000304_16138794_16144084 NA coding upstream 111548 16138794 ~ 16144237 (+)
CI01000304_16132778_16137222 MDH2.S, MDH2, MDH2.L coding upstream 118437 16131875 ~ 16137348 (+)
CI01000304_16261912_16276701 B3GLCTB coding downstream 3760 16261912 ~ 16277453 (+)
CI01000304_16315830_16336387 RXFP2A coding downstream 57016 16315168 ~ 16336928 (+)
CI01000304_16347460_16350144 NA coding downstream 88624 16346776 ~ 16350185 (+)
CI01000304_16358266_16367985 FRY, FRYB coding downstream 100114 16358266 ~ 16368340 (+)
CI01000304_16370076_16401491 FRY, FRYB coding downstream 111818 16369970 ~ 16401614 (+)
G427866 NA non-coding upstream 35377 16220030 ~ 16220408 (+)
G427868 NA non-coding upstream 35848 16218447 ~ 16219937 (+)
G428027 NA non-coding upstream 125705 16129707 ~ 16130080 (+)
G427864 NA non-coding upstream 158292 16091400 ~ 16097493 (+)
G428020 NA non-coding upstream 166613 16088069 ~ 16089172 (+)
G428069 NA non-coding downstream 164595 16422747 ~ 16422949 (+)
G428099 NA non-coding downstream 217070 16475222 ~ 16555622 (+)
G428116 NA non-coding downstream 391740 16649892 ~ 16654939 (+)
G428188 NA non-coding downstream 473455 16731607 ~ 16731828 (+)
G428197 NA non-coding downstream 521211 16779363 ~ 16780995 (+)
G428017 NA other upstream 172071 16083230 ~ 16083714 (+)
G427860 NA other upstream 366194 15885454 ~ 15889591 (+)
G426828 NA other upstream 1305193 14948890 ~ 14950592 (+)
G426312 NA other upstream 1924899 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2676938 13578049 ~ 13595097 (+)
CI01000304_16505174_16506124 NA other downstream 246710 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 497794 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 752578 17009769 ~ 17023882 (+)
CI01000304_17315088_17315342 NA other downstream 1056686 17315087 ~ 17315600 (+)
G429050 NA other downstream 1424119 17682271 ~ 17684763 (+)

Expression


Co-expression Network