CI01000304_16505174_16506124


Basic Information

Item Value
gene id CI01000304_16505174_16506124
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16504764 ~ 16513625 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_16505174_16506124.mRNA
CTATTAATGGGACGCGCGCACATGCTCTTGCTTGGTTACCACCTTTTGATTGACAGTCGGGCAGCAGCACGCAGGCGTGGTGAGCGCTCCCGCAGACAGGGGGCGTCAATATGGCGTCCTGAGAAAGACAACACAGCCCGACACCGCACCGATCTTCGGCTGACATCGGGAGGAGAGAGGGACCGTTTCGCCAAACATTAGACGTGATTTCGTTCTGTGCATCCCTCTGAACGGCTGCAAGCATCGGGTTTGGATGTGCACATCTCGGAGGAGGAGGAGGAGGACAGCCTTGTGACACCTGATCGAGAATTTTCCTTTTTCATCTGTATTTGATGCTGCTGCTCAGTGCTCGGTGATACAAAAGCAGGTGAGACCGAGGCGACCGCTCCTTTTTGGGATTCGGGTCGGAAATGTCGAGCGAGAAACCGGTTTTGGCACCGGGTTCCGCCTCGCTCACGGACCGAGAAGCCCCCCCACCACCAGCAGCACCACCGGGTTCGGGGCAGCAAGTCGTAACGGGCTCTGTTACCGGGGACATGATGGTGTCTGGATCGGGCGCCGTGGTTCTACCGGCCGGGGTGATAAACCCTTCGGTTCCGATCCGGAATATCAAGATGAAATTCGCCGTGCTCATCGGTTTGATCCAGGTCGGGGAGGTTAGCAACAGAGATATCGTGGAGACAGTTTTAAATCTGATATGGCTGCTGTTTTTGCTCATGGAGGCCACAGGCTGGTAAGCGAGGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_16505174_16506124.mRNA False 747 mRNA 0.56 2 16504764 16506134

Neighbor

gene id symbol gene type direction distance location
CI01000304_16470293_16490666 STARD13, STARD13A coding upstream 12723 16470253 ~ 16492041 (+)
CI01000304_16458657_16462430 NA coding upstream 41741 16458520 ~ 16463023 (+)
CI01000304_16433456_16438415 NA coding upstream 66233 16432429 ~ 16438531 (+)
CI01000304_16406577_16413911 KL coding upstream 90541 16406067 ~ 16414223 (+)
CI01000304_16370076_16401491 FRY, FRYB coding upstream 103150 16369970 ~ 16401614 (+)
CI01000304_16565077_16641637 NBEA, NBEAA coding downstream 58943 16565077 ~ 16642341 (+)
CI01000304_16740135_16740524 SERTM1 coding downstream 232712 16738846 ~ 16740995 (+)
CI01000304_16743239_16743811 RFXAP coding downstream 236369 16742503 ~ 16743811 (+)
CI01000304_16761621_16764983 EXOSC8 coding downstream 255487 16761372 ~ 16765057 (+)
CI01000304_16830439_16835774 NSUN5 coding downstream 324305 16830439 ~ 16836287 (+)
G428069 NA non-coding upstream 81815 16422747 ~ 16422949 (+)
G427866 NA non-coding upstream 284356 16220030 ~ 16220408 (+)
G427868 NA non-coding upstream 284827 16218447 ~ 16219937 (+)
G428027 NA non-coding upstream 374684 16129707 ~ 16130080 (+)
G427864 NA non-coding upstream 407271 16091400 ~ 16097493 (+)
G428116 NA non-coding downstream 143758 16649892 ~ 16654939 (+)
G428188 NA non-coding downstream 225473 16731607 ~ 16731828 (+)
G428197 NA non-coding downstream 273229 16779363 ~ 16780995 (+)
G428201 NA non-coding downstream 286159 16792293 ~ 16792623 (+)
G428232 NA non-coding downstream 347416 16853550 ~ 16853767 (+)
G428017 NA other upstream 421050 16083230 ~ 16083714 (+)
G427860 NA other upstream 615173 15885454 ~ 15889591 (+)
G426828 NA other upstream 1554172 14948890 ~ 14950592 (+)
G426312 NA other upstream 2173878 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2925917 13578049 ~ 13595097 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 504596 17009769 ~ 17023882 (+)
CI01000304_17315088_17315342 NA other downstream 808704 17315087 ~ 17315600 (+)
G429050 NA other downstream 1176137 17682271 ~ 17684763 (+)
CI01000304_17698564_17703891 NA other downstream 1197176 17698467 ~ 17704096 (+)

Expression


Co-expression Network