CI01000304_16765458_16765853


Basic Information

Item Value
gene id CI01000304_16765458_16765853
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16765139 ~ 16765853 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_16765458_16765853.mRNA
TTGCAATTCTTGCAGCACCAAATGCAACAGCAGCAAATGGGTATGGCAGTGGGGGCGGCGGCACAGGCGGCACTGCCACGGCAACATTCCGCCAACCAGCAAAGAAGGGTGCAGGAATTGCCCACCTGACCTCAGGCCAGACGAATAGATGTATTACAGCGAGGACATTTAGAGCAGAGGACCTTAGAGTATTACCGTATTTTTTAAAGAAATACAAGATCTGAAATCAGACAATTCTTCTTGTAGGGTTCTCTATGGCATGCTGTCTTTATTTTCCTTCCAAATGGCCCTTTCAATGAGATCCTGTTTGGCTCGAAAGGGTGGACCCTACGCACACTAATAAGGGCCGTACAGATGTGCCTAAATCACCTGTTGCTCACCTTTACCGTTACGAGAAAACATTCTCTCTACTGCTGGATGTCAGAGTGATGGGCCGCCTTGTCCCAGCATGCAATTACATGTGCGGTTTTTATACAGCACATTTTAAAATGGCATTTTGTTATACTGAGAGGGGAGTTGATGTATATTCTTATGGAGAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_16765458_16765853.mRNA True 543 mRNA 0.46 2 16765139 16765853

Neighbor

gene id symbol gene type direction distance location
CI01000304_16754929_16761111 ALG5 coding downstream 4028 16754724 ~ 16761111 (-)
CI01000304_16746258_16751678 SMAD9.S, SMAD8A, SMAD9, SMAD8C coding downstream 13461 16745703 ~ 16751678 (-)
CI01000304_16722727_16724691 CCNA1 coding downstream 40291 16722567 ~ 16724848 (-)
CI01000304_16711244_16719831 SPG20A, SPG20 coding downstream 45308 16711244 ~ 16719831 (-)
CI01000304_16684166_16704849 DCLK1 coding downstream 59045 16684060 ~ 16706094 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H coding upstream 3564 16769417 ~ 16780398 (-)
CI01000304_16783635_16804462 CLG3H21ORF91 coding upstream 17683 16783536 ~ 16804462 (-)
CI01000304_16816039_16828777 RIPK4 coding upstream 49597 16815450 ~ 16829000 (-)
CI01000304_16838208_16848663 POM121C, POM121 coding upstream 71894 16837747 ~ 16849079 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC coding upstream 88976 16854565 ~ 16860911 (-)
G428681 NA non-coding downstream 156125 16603550 ~ 16609014 (-)
G428638 NA non-coding downstream 170630 16587475 ~ 16594509 (-)
G428547 NA non-coding downstream 484618 16280266 ~ 16280521 (-)
G428502 NA non-coding downstream 544726 16220029 ~ 16220413 (-)
G428509 NA non-coding downstream 545247 16218523 ~ 16219892 (-)
G428707 NA non-coding upstream 46331 16812184 ~ 16812467 (-)
G428710 NA non-coding upstream 113216 16879069 ~ 16879279 (-)
G428662 NA non-coding upstream 120601 16886454 ~ 16886952 (-)
G428713 NA non-coding upstream 148956 16914809 ~ 16916803 (-)
G428729 NA non-coding upstream 185348 16951201 ~ 16955072 (-)
G427376 NA other downstream 1503734 15258964 ~ 15261405 (-)
G427423 NA other downstream 2403247 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 2477535 14286960 ~ 14294449 (-)
CI01000304_14265881_14269102 NA other downstream 2495568 14265476 ~ 14269571 (-)
G427309 NA other downstream 2556840 14181932 ~ 14237078 (-)
G429331 NA other upstream 1158010 17923863 ~ 17924684 (-)
G429499 NA other upstream 1471866 18237719 ~ 18238319 (-)
G429673 NA other upstream 1820589 18586442 ~ 18591856 (-)

Expression


Co-expression Network