CI01000304_17009769_17023302 (ZDHHC20, ZDHHC20A)


Basic Information

Item Value
gene id CI01000304_17009769_17023302
gene name ZDHHC20, ZDHHC20A
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17009769 ~ 17023882 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

Function

symbol description
zdhhc20a Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in Golgi membrane; perinuclear region of cytoplasm; and plasma membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC20 (zinc finger DHHC-type palmitoyltransferase 20).
zdhhc20 Enables protein-cysteine S-palmitoyltransferase activity and zinc ion binding activity. Involved in peptidyl-L-cysteine S-palmitoylation. Located in intracellular membrane-bounded organelle and plasma membrane. Is integral component of Golgi membrane.

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K20028 ZDHHC2_15_20; palmitoyltransferase ZDHHC2/15/20

RNA

RNA id representative length rna type GC content exon number start site end site

Neighbor

gene id symbol gene type direction distance location
CI01000304_16975753_16997470 PHLDB2A coding upstream 12283 16975254 ~ 16997486 (+)
CI01000304_16969702_16974059 NA coding upstream 35340 16969702 ~ 16974429 (+)
CI01000304_16954628_16965188 NA coding upstream 44169 16954628 ~ 16965600 (+)
CI01000304_16914506_16925875 NA coding upstream 83643 16914506 ~ 16926126 (+)
CI01000304_16889868_16901389 PORA, POR coding upstream 107643 16889868 ~ 16902126 (+)
CI01000304_17054994_17056008 NA coding downstream 31259 17054849 ~ 17059151 (+)
CI01000304_17210568_17214463 NA coding downstream 186978 17210568 ~ 17214638 (+)
CI01000304_17266905_17272656 SMYD4 coding downstream 242654 17266244 ~ 17272740 (+)
CI01000304_17290004_17290901 NA coding downstream 266414 17290004 ~ 17292234 (+)
CI01000304_17315088_17315342 NA coding downstream 291498 17315087 ~ 17315600 (+)
G428232 NA non-coding upstream 156002 16853550 ~ 16853767 (+)
G428201 NA non-coding upstream 217146 16792293 ~ 16792623 (+)
G428197 NA non-coding upstream 228774 16779363 ~ 16780995 (+)
G428188 NA non-coding upstream 277941 16731607 ~ 16731828 (+)
G428116 NA non-coding upstream 354830 16649892 ~ 16654939 (+)
G428153 NA non-coding downstream 467 17024057 ~ 17025288 (+)
G428255 NA non-coding downstream 18613 17042203 ~ 17042429 (+)
G428260 NA non-coding downstream 24442 17048032 ~ 17049987 (+)
G428262 NA non-coding downstream 26805 17050395 ~ 17050678 (+)
CI01000304_16761621_16764983 EXOSC8 other upstream 248117 16761372 ~ 16765057 (+)
CI01000304_16505174_16506124 NA other upstream 468724 16504764 ~ 16513625 (+)
G428017 NA other upstream 926055 16083230 ~ 16083714 (+)
G427860 NA other upstream 1120178 15885454 ~ 15889591 (+)
G426828 NA other upstream 2059177 14948890 ~ 14950592 (+)
G429050 NA other downstream 658681 17682271 ~ 17684763 (+)
CI01000304_17698564_17703891 NA other downstream 679720 17698467 ~ 17704096 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other upstream 3688 17009769 ~ 17023882 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location