CI01000304_17332233_17338077


Basic Information

Item Value
gene id CI01000304_17332233_17338077
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17332233 ~ 17338077 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_17332233_17338077.mRNA
ATGACCGATCATAAGGCAAGCTCTGACTACGTGCGCTACGAGAGCCAACCCCTAAAATACTGGCCCCGAAAGGGAAAGTCTGCAGCCTGGGCAAACATCACTAAGACCTTACTATTAGTAGCTATTTGTTTACCACTGAGGTATCATGTGATTGTGACCCATAGATCAATGCTTGTTATGATTGGTGCTTCATGGACACTGGCACTGATGCAAACAATCACTGCAGCAGTTTTCATGACTAGACTTTCTTTCTGCAGAGCTGGTGTCATAATTATTCGTTTCTGTAATCGCGGGTCTGTTTTCTTAAGCTATGTCATCATTAGTGTTCTGTTTCAGTTCTTTATCGCAGGTAACACAACATTCCAGACAACAGGCGACTTGAGCTCCACGCAGTCAAACTCCTCTGCAAATGTGACCTTTGTTCGTCCTGCAACATTTTTCATCAGTGGCTTTTCTAATATGCCACATGCAAAGTACTACTATGTGTTCTTGTGTTTGGTGTATGCTGTGACTGTTTTAGGGAATTCATTTATCATGTGTATCATTTATTTGGCCCGCAGACTTCACACAGCCAAATACATTGTTGTTTTCCATCTGGCCATTTCTGATCTGTGTGAAAGCTCGGCTTTGATTCCAAAAGTCATTGACATGTTTTTATTTGAGCACCAGGAGATTTCATATGAAGCATGTTTGATGAATATGTTTTTTGTTTTTCATTTCATGAATCTGCAGTCTTTGACACTAGTTGCCTTGGCTTATGACAGACTGGTTGCTATTTGTTTTCCTCTACGGTATCATGCCATTGTAACCAAAACAGCCATGTTTCTGATCATAGGCGTTATGTGGACCCTTTCTGTGACTTTTATTGCTTTACTGGTGAGTTTGATCACAAGACTCTCTTTTTGTAGCTCAACTGTAGTAAATAGTTATTTTTGTGATCACGGCCCTCTCTATAGACTGGCTTGCAATGATAATGCCATAAATAGTATCATGGCAAATATTTGCATTGGTCTCCTGATATGCATACCACTGATATTAATAATCATCTCATATTTCTGCATTGCTCTGGCTCTGCTTAAGATTGCTCATGGTGCTGAACGGATTAAAGCCATGAAAACCTGCACCTCACATCTCATGTTGGTGGCGATTTTTTATGTCCCACTTTTAGGTACTAATACTGCAGCTTTAACAACATTTATCCATCCAAACGCCCGGATAATTAACAATTCCTTAACTCAGATAATACCACCCATGCTGAATCCCATCATATACACTCTAAAGACAGAGGAGGTCATGCAATCCATAAAAGAACTGTACAAACGAAGCAAG

Function

NR:

description
olfactory receptor 3, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_17332233_17338077.mRNA True 1329 mRNA 0.40 4 17332233 17338077

Neighbor

gene id symbol gene type direction distance location
CI01000304_17318429_17320775 OR109-13 coding downstream 11335 17318424 ~ 17320898 (-)
CI01000304_17067366_17070132 OVCA2 coding downstream 262101 17067330 ~ 17070132 (-)
CI01000304_17026143_17041443 NA coding downstream 290697 17026066 ~ 17041536 (-)
CI01000304_17003708_17006278 NA coding downstream 325850 17003365 ~ 17006383 (-)
CI01000304_16929873_16945323 GABRR3A, GABRR3 coding downstream 385406 16929448 ~ 16946827 (-)
CI01000304_17348461_17354382 NA coding upstream 10002 17348079 ~ 17354622 (-)
CI01000304_17369357_17411120 NA coding upstream 31077 17369154 ~ 17411203 (-)
CI01000304_17413669_17414667 OR109-1 coding upstream 75437 17413514 ~ 17414908 (-)
CI01000304_17488992_17490128 NA coding upstream 150047 17488124 ~ 17490494 (-)
CI01000304_17538160_17540583 UBL3A, UBL3.S, UBL3 coding upstream 200083 17538160 ~ 17540583 (-)
G428912 NA non-coding downstream 8678 17323213 ~ 17323555 (-)
G428909 NA non-coding downstream 15752 17316280 ~ 17316481 (-)
G428863 NA non-coding downstream 96537 17235442 ~ 17235696 (-)
G428860 NA non-coding downstream 106356 17225578 ~ 17225877 (-)
G428859 NA non-coding downstream 112232 17219747 ~ 17220001 (-)
G429172 NA non-coding upstream 6825 17344902 ~ 17360092 (-)
G429266 NA non-coding upstream 185305 17523382 ~ 17523715 (-)
G429216 NA non-coding upstream 191241 17529318 ~ 17529711 (-)
G429238 NA non-coding upstream 226023 17564100 ~ 17564398 (-)
G429220 NA non-coding upstream 227625 17565702 ~ 17568817 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 464995 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 551274 16769417 ~ 16780398 (-)
G427376 NA other downstream 2070828 15258964 ~ 15261405 (-)
G427423 NA other downstream 2970341 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 3044629 14286960 ~ 14294449 (-)
G429331 NA other upstream 585786 17923863 ~ 17924684 (-)
G429499 NA other upstream 899642 18237719 ~ 18238319 (-)
G429673 NA other upstream 1248365 18586442 ~ 18591856 (-)

Expression


Co-expression Network