CI01000304_17582446_17582872


Basic Information

Item Value
gene id CI01000304_17582446_17582872
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17582244 ~ 17582872 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_17582446_17582872.mRNA
GCCCTGCCCACAACACATGCACTCATTCTTCAGTCAGCGTCTTTTCGCGGCCATGGCAACATCAGTGGGTAACAGACTGTGGACCAGTCGAATGTAAAATTGCCTCGAATAAAGTTTTCGCTATTTGTCTGCACTCTAAGGCAAACGGAAAAAACTACAAGTCCCTTGCAAAGGAATATGTAAAAGCGGTGACGTTTGTGCTGTTTTTACATACAAGCACGGCTTGATCAATTTGATTTTATAGGAAGAATGATTGAATGGAGTCATTCATGGTCGATTGTCAGGTTAATTCGTTTTTAAGAAATAGATCGTTCGAGTAATTTGAGGTGTCTCGAACGGTATTTATTATGTGTTTCACGTCAAGTGTCCGACAAACGAAATTGTCTTATTTTAGACAGTCACTGTGTGGGCAGAGCAAAGGTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_17582446_17582872.mRNA True 429 mRNA 0.41 2 17582244 17582872

Neighbor

gene id symbol gene type direction distance location
CI01000304_17579139_17581078 NA coding downstream 643 17579118 ~ 17581601 (-)
CI01000304_17571701_17576895 KATNAL1 coding downstream 5349 17571224 ~ 17576895 (-)
CI01000304_17538160_17540583 UBL3A, UBL3.S, UBL3 coding downstream 41661 17538160 ~ 17540583 (-)
CI01000304_17488992_17490128 NA coding downstream 91750 17488124 ~ 17490494 (-)
CI01000304_17413669_17414667 OR109-1 coding downstream 167336 17413514 ~ 17414908 (-)
CI01000304_17584110_17585466 HMGB1B, HMGB1, HMGB1A coding upstream 988 17583860 ~ 17585669 (-)
CI01000304_17609266_17610594 MEDAG coding upstream 26371 17609243 ~ 17610594 (-)
CI01000304_17613042_17613658 NA coding upstream 29794 17612666 ~ 17614053 (-)
CI01000304_17614848_17642103 NIPBLB, NIPBL coding upstream 31853 17614725 ~ 17642103 (-)
CI01000304_17652862_17661953 SLC1A3A, SLC1A3B, SLC1A3 coding upstream 68255 17651127 ~ 17662252 (-)
G429220 NA non-coding downstream 13427 17565702 ~ 17568817 (-)
G429238 NA non-coding downstream 17846 17564100 ~ 17564398 (-)
G429216 NA non-coding downstream 52533 17529318 ~ 17529711 (-)
G429266 NA non-coding downstream 58529 17523382 ~ 17523715 (-)
G429172 NA non-coding downstream 222152 17344902 ~ 17360092 (-)
G429202 NA non-coding upstream 77002 17659874 ~ 17704143 (-)
G429224 NA non-coding upstream 136074 17718946 ~ 17794447 (-)
G429300 NA non-coding upstream 237888 17820760 ~ 17821223 (-)
G429301 NA non-coding upstream 239287 17822159 ~ 17822403 (-)
G429303 NA non-coding upstream 242570 17825442 ~ 17825664 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 715006 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 801285 16769417 ~ 16780398 (-)
G427376 NA other downstream 2320839 15258964 ~ 15261405 (-)
G427423 NA other downstream 3220352 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 3294640 14286960 ~ 14294449 (-)
G429331 NA other upstream 340991 17923863 ~ 17924684 (-)
G429499 NA other upstream 654847 18237719 ~ 18238319 (-)
G429673 NA other upstream 1003570 18586442 ~ 18591856 (-)

Expression


Co-expression Network