G417900


Basic Information

Item Value
gene id G417900
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 86960 ~ 89259 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480033
TCTCAACTCTCCTTAAAAATGTAATGGTTAAAACATTCTACATAAATGTTTACAGGATTCTACATAAGCATCTACGTAAGTGTTTACAGGATTGACCCTTCAAATTTTTTAGTATCATAGCTAAAATATCTTATTTTGAAAAGCAAATGTACTTGAGGCATTTCTACCATGTTACCAATAAGTGAAGATTTATGCATAAAGTAACATGTCGTTGTTTTTTAAGAAACAGCTTGTGATTCAGCATCTATGCAAGATGCACTAAAGCACTTTCTGTGCTTTAGGCACACAAAGTACCTTCATGATATTAAAGTGAAAAGAACGACATTTTCTTTGATACCAGTTCTCGATGTAATGCAGAATATTTACATGTACGCTTATTCTACAATAAAGTTTTTTCTAGAGCGTTAACAAAAGCAGCGCATTTTAAGCATCACATTACATTATCTAGACTTACACACAAAGTAAAAAGGGCCAAGATGAAGCATTCGAATACATAAATGAGATTGAACATTCAAGTGCATTTAAACATTCCCTTTAAACGACAGGTGTAATTGGACATGAAAATGGGTCCGAAAACGAATGAAAAACTGAGCTGTCTGGCCATATTAGTGTATTAAATTCACAACATGATATTTATGAATTCTTACACATTCTTAAAAGTTTAAGACATGGCAATATGTTACAATGTGTATTTTAAAGAAATAATGTCTATATACAGCAAGACTGCCATCGTTGCAAAGTATTTAAGATATATTTCCAAAGATTGTTTCCAATACATAACATGTAAATTATGTGCAGATAATCAGTTGACTTCAATATACAATTTAAAATTGTGACAAGGAATAATTTTAGTGACAAACCAGTATGTACTGTAGAAACTTGACAGGGACAAATGCAGAGAGCACCCTAGCGAACCAGTGTATGTCACATCCTCTGTCAAACACGCTATGCTGTTGGACTGAGCATTTTTGATCATGATCAAAAATCACATTTCCATCCAGATGAAGCCATCCAATACAACAAACAGAAAAAACAACAACATAAAATTACAAGATAATAAAAAAATGTGCTGATTTAAAGCAGGCTTTCTAATGAGCAAATCCACTTTGGAAGACTAGGATATGTTAACGCTATTTCACAAATTAATAAAATAGTTAAATTCACAAACCGACAGAGTTGGTAAATGTAAAGTAATGTGTAATAATTTAATTGAGTTCAGTTTTTACAAAAATCAATATCAGCAAATGTAATGGAAGGAATTAAGAGGCTTTTTGACTTGCAGTCAGTGAGGCAAGACAAATAAAATGTGGAGCTGCACCTTTTTTCCACAAAGTGAAAGTCACTTGAGACAAATGTTGTTTCAACACTGACATTTTAAAAAAAATATCTTCTGTTTTCCACAGAAGAAAGAAAGGCATACAGGTTTGAAACATTATGAAGGTGAGTGAATGATGACAGAATTTTCAGGGCACACGGATGTTACAAGGTCTGCGTTTTCTGTTGGTTCTGTCCCTGCTTTGAGGTTGGCAAAGAATCAATTCTTTAGGAGAAAAAAAATATTAAATGCAGTCAAAGCTAGCACAATATGTGTCACAACACAGAGCCACAGGAAGAACAAGAAATAAAAAAATAAGCACATTGCATAGTGTATAAGCTCATTTTAGTGTTTTGTGAAAGCATGCGTAATGTTTAGTGTCTTTAGGGTGTGTAGTCCACATAACATCCACTACATTGAATGCTAACGTAAACAAACGTGGTAAAAGTAAATGAAAATGTAGTGTTAAATAATGGAATATCTATCAGTCTAACTTGCGTGCCTTCTTGTATTCTTCATATTGTGTGCTAACTGCATGAGGATAACTGAAGTGACATGAACGACCCTCTACTTTTAGGCCCATAAAAACACTTGAGCCGACCCGGCGGGCGACAGAATCAGCAGGTGGGCCGGGCAGACAAGAGCTGCTACTGTTGGGAGGTCGAGCATCCAAACACTTCTGATACCTCAGCTGTAAATGATGGAAGATATAATTTAAACTCATTTAAATAATATAATTTAAAAACATTTTAAAAGAACAGCAACATATTTCAACTTCAACTAGCTATTAGATTATACAAAGTCTGTACAGCCATGGCCAAAAGTATTGGCAGTGACATAAATTTTGTGTTTTCTTGCTTATTTTGTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480033 True 2186 lncRNA 0.34 2 86960 89259

Neighbor

gene id symbol gene type direction distance location
CI01000304_00047400_00073206 NA coding upstream 13622 46322 ~ 73338 (+)
CI01000304_00292894_00306187 PHAX coding downstream 203635 292894 ~ 306479 (+)
CI01000304_00308220_00310793 NA coding downstream 218414 307673 ~ 311267 (+)
CI01000304_00315935_00342330 LMNB1 coding downstream 225483 314742 ~ 342531 (+)
CI01000304_00370333_00419672 MEGF10 coding downstream 281074 370333 ~ 420755 (+)
CI01000304_00424703_00434890 PRRC1 coding downstream 335444 424703 ~ 435066 (+)
G417907 NA non-coding upstream 41171 45537 ~ 45789 (+)
G417904 NA non-coding upstream 60716 26033 ~ 26244 (+)
G417937 NA non-coding downstream 45587 134846 ~ 135133 (+)
G417939 NA non-coding downstream 47875 137134 ~ 137631 (+)
G417941 NA non-coding downstream 49954 139213 ~ 139451 (+)
G417942 NA non-coding downstream 50273 139532 ~ 139853 (+)
G417943 NA non-coding downstream 50884 140143 ~ 140471 (+)
G417987 NA other downstream 137444 226703 ~ 227853 (+)
G418059 NA other downstream 468833 558092 ~ 564451 (+)
G418116 NA other downstream 783411 872670 ~ 875249 (+)
G418981 NA other downstream 2003235 2092494 ~ 2093678 (+)
G420445 NA other downstream 4214077 4303336 ~ 4303832 (+)

Expression


Co-expression Network