G417937


Basic Information

Item Value
gene id G417937
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 134846 ~ 135133 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480075
GTCTGATTGGTCATGGCGGCGGTGTTACAACTATCTATAGAGATATTCTTAATGTTACTCAGAAAACAGAACACAGGTTTAATTCTTTTGAAGTGCTTGTGCTAAATTTTACACTCTCAGATATAAGAAAAAAGTCCCTATCATCTCTTGCTTTGGCTACCGTTTATAGACCTCCAGGGCCCTATGTTGATTTCCTAAAAGAGTTTGCAGATTTTCTCTCAGACCTATTGGTCAACGTCGATAAAGCGCTGATTGTTGAAGATTTTAACATTCATGTGGACAATACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480075 True 288 lncRNA 0.38 1 134846 135133

Neighbor

gene id symbol gene type direction distance location
CI01000304_00047400_00073206 NA coding upstream 61508 46322 ~ 73338 (+)
CI01000304_00292894_00306187 PHAX coding downstream 157761 292894 ~ 306479 (+)
CI01000304_00308220_00310793 NA coding downstream 172540 307673 ~ 311267 (+)
CI01000304_00315935_00342330 LMNB1 coding downstream 179609 314742 ~ 342531 (+)
CI01000304_00370333_00419672 MEGF10 coding downstream 235200 370333 ~ 420755 (+)
CI01000304_00424703_00434890 PRRC1 coding downstream 289570 424703 ~ 435066 (+)
G417900 NA non-coding upstream 45587 86960 ~ 89259 (+)
G417907 NA non-coding upstream 89057 45537 ~ 45789 (+)
G417904 NA non-coding upstream 108602 26033 ~ 26244 (+)
G417939 NA non-coding downstream 2001 137134 ~ 137631 (+)
G417941 NA non-coding downstream 4080 139213 ~ 139451 (+)
G417942 NA non-coding downstream 4399 139532 ~ 139853 (+)
G417943 NA non-coding downstream 5010 140143 ~ 140471 (+)
G417944 NA non-coding downstream 5685 140818 ~ 141241 (+)
G417987 NA other downstream 91570 226703 ~ 227853 (+)
G418059 NA other downstream 422959 558092 ~ 564451 (+)
G418116 NA other downstream 737537 872670 ~ 875249 (+)
G418981 NA other downstream 1957361 2092494 ~ 2093678 (+)
G420445 NA other downstream 4168203 4303336 ~ 4303832 (+)

Expression


Co-expression Network